Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00488 ATGGCTCATTCAAAAAGAGCACCATTTTCATTTTTCTTCCTCACCATCATCTTTTTCTTACTTATCTGGTCCATTTTCATTATAGAAATCACCAATGGGGATGTTATCCCTAATGTTACTGTTGCTCAAGATGGGAGTGGGAATTACAAAACGGTGACGGAAGCAGTACTTGCAGCACTCGATCGAAACATGCAACGCTATGTCATTTTTATAAAGAAGGGTGCTTACTTGGAGAAAGTTTTCATTAATGATGTTAAGTGGATTATCATGCTGATTGGAGAGGGTATGCAGTCTACTATCATCACCGGAAGCATGGGGTGTCGTGGGAATAAGTCGAACGCATGCACATATGACTCGGCTACCTTTAGTAAGGTTACTGCAAACTCTTAA 390 0.4026 MAHSKRAPFSFFFLTIIFFLLIWSIFIIEITNGDVIPNVTVAQDGSGNYKTVTEAVLAALDRNMQRYVIFIKKGAYLEKVFINDVKWIIMLIGEGMQSTIITGSMGCRGNKSNACTYDSATFSKVTANS 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00488 129 Pfam Pectinesterase 38 125 IPR000070 GO:0030599|GO:0042545
Mepo6g00488 129 SUPERFAMILY Pectin lyase-like 38 125 IPR011050 -
Mepo6g00488 129 PANTHER PECTINESTERASE 37 125 - -
Mepo6g00488 129 Gene3D - 32 129 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00488 Mepo-Chr6 4995592 4995981 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00488 31 123 Carbohydrate Esterase AT3G43270 43.011 1.22e-18 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00488 K01051 - rvl:131314674 89.3521