Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00487 ATGGCATGGTACAATGATAAAGATAACAACAACTCTGATGTCACTGATAACATAAAACTCAATGAAGAAATTGATCAAAATCAAACCATGGAATGCCCCTCATGCGGCCATAATATTGAAGCAAAAAATCAGGGTGGAGTTAATGAATTGCCGGGGTTACCAGCTGGAGTGAAATTTGACCCAAATGATGTAGAAATACTAGAGCATTTGGAGGCAAAAGTGAGTTCTGATGTTCGCAAGCTTCATCCACTTATTGATGAGTTCATACCAACGCTTCAAGGAGAGAATGGAATTTGTTATACACACCCAGCACAACTACCAGGAGTTAGCAAAGATGGTCAAATTCGCCACTTTTTTCATAGGCCTTCGAAAGCATACACAACAGGAACAAGGAAAAGAAGAAAGGTTCACACTGATGAAGAAGGAATTGAAACAAGATGGCACAAAACAGGGAAAACTAGAGCAATTTTTTCCAATGGTGTTGTGAAGGGATTTAAGAAGATACTAGTACTCTACACCAACTATTGCAAAGAAGGAAAACCAGAGAAGACTAATTGGGTGATGCATCAATACCATCTTGGTATGAATGAAGAAGAAAGAGATGGAGAATTTGTTGCTTCAAAGATCTTCTACCAGACACAGCCTAGACAACATGGTAATTCCATTAATAATGTAAAAGATTCATATGAAAAAATAATCAACAAAGGAAGTGGCCATGGCAATAACAGTGAAGCCCCCAACAATGCAGCTCATGTGGAATGCTACAATGCTTGTTATACAAATTATGACCATATGCATGTTGGTTATAGTAGGGAAAGCACTCCACAACTCATTATTCCAAACATGGCTGTCCAAGGTGATGGAACTATTATTCACTTATCAATGGATCATGCAAACAAAGTAAGAGTGTTGGAGAGAAAGTAA 924 0.381 MAWYNDKDNNNSDVTDNIKLNEEIDQNQTMECPSCGHNIEAKNQGGVNELPGLPAGVKFDPNDVEILEHLEAKVSSDVRKLHPLIDEFIPTLQGENGICYTHPAQLPGVSKDGQIRHFFHRPSKAYTTGTRKRRKVHTDEEGIETRWHKTGKTRAIFSNGVVKGFKKILVLYTNYCKEGKPEKTNWVMHQYHLGMNEEERDGEFVASKIFYQTQPRQHGNSINNVKDSYEKIINKGSGHGNNSEAPNNAAHVECYNACYTNYDHMHVGYSRESTPQLIIPNMAVQGDGTIIHLSMDHANKVRVLERK 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00487 307 Pfam No apical meristem (NAM) protein 54 193 IPR003441 GO:0003677|GO:0006355
Mepo6g00487 307 Gene3D NAC domain 63 216 IPR036093 GO:0003677|GO:0006355
Mepo6g00487 307 ProSiteProfiles NAC domain profile. 53 212 IPR003441 GO:0003677|GO:0006355
Mepo6g00487 307 FunFam NAC domain-containing protein 73 62 216 - -
Mepo6g00487 307 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 16 236 IPR044799 GO:0003700
Mepo6g00487 307 SUPERFAMILY NAC domain 49 212 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00487 Mepo-Chr6 4988361 4991433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00487 32 244 NAC Transcription Factor Family AT1G28470 70.089 4.87e-108 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo6g00487 NAM 7.4e-21 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g00487 6 4988361 4991433 Mepo6g00487 6 4988361 4991433 ECH