Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00486 ATGAACCTTGGGGAACATATTGCTTATGACATAGTCATGGCAATTCTATCAATATCTCTCATAATTCTTGGTATTTTCCTCTTTTTTGCTTGCAAAAAGAAACCAGTTGAATCAGAAGAAACACTTCCACTGAAACACAGTGCTCGTGCATACCCTTTAACAGTTATTGATATTGCTACAAATGGCTTCAACCATAGGAGAATCATTGGAAAAGGTCGTTTAGGAACAGTTTATGCTGGAAAACTCGAAAATGAAGAGCTTGTAGCTGTGAAACGCATTCATTCTGTTCTTGTGTTAAGCAACGCAGGATTTGGTTTCTCATCTGTGATGAAATGGCTCTCTTTAGCTCAACACCCTAACGTTGTTCCCATAATAGGATTCTCAGAAGCACCAGGTGAAAGAGTTATATTGATGGAGTTTGTTCCAATGGCGAATTTGGAATTTTACTTGCATGTAAATCATGATGGTGGTTCTTCTTCACTTTTGGATTGGAACAAGAGGTTTAAGATTGCAGCTGGAGTAGCTAAAGGGCTACAATATCTTCATGAAGTGGTAGCACCAAATATTATACATGGTTGTGTTAAGTCTTCTAATGTTCTTATTGATGTTAATTTTTGTGCTAAAATTTCTGATTATGGACTTAGTTTTTTGGGGGGTTTAGAAAAGAGAGGGTTAATTGGCTATGTAGATGATGAATATTGGAATGAAGGAATTAGGGGTGGTGGTGTTTGTAAGGAAAGTGATGTCTATGGGTTGGGAGTGGTTTTGTTGGAGCTTTTAAGTGGAAGAGGATGTGAGGGTGGATTATTGGTGAAATGGGCTTTGCCTTTGATTAAGGATATGAGATTTAGTGAAGTTTTAGATCCTAGGTTGATTATTCCTTCTAATATGAATGCTATTGTTAGATTAGCAAAAGTTGCTTCAGCTTGTGTTGGTAATTCAAGGAAATGTAGACCTTGTGTGAACCATGTGGTGAACATTTTGAATGATTTAGAGATAGAAGTGTGCCTCTTATCAAATTGA 1023 0.3695 MNLGEHIAYDIVMAILSISLIILGIFLFFACKKKPVESEETLPLKHSARAYPLTVIDIATNGFNHRRIIGKGRLGTVYAGKLENEELVAVKRIHSVLVLSNAGFGFSSVMKWLSLAQHPNVVPIIGFSEAPGERVILMEFVPMANLEFYLHVNHDGGSSSLLDWNKRFKIAAGVAKGLQYLHEVVAPNIIHGCVKSSNVLIDVNFCAKISDYGLSFLGGLEKRGLIGYVDDEYWNEGIRGGGVCKESDVYGLGVVLLELLSGRGCEGGLLVKWALPLIKDMRFSEVLDPRLIIPSNMNAIVRLAKVASACVGNSRKCRPCVNHVVNILNDLEIEVCLLSN 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00486 340 ProSiteProfiles Protein kinase domain profile. 63 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00486 340 PIRSF ILK 30 336 - -
Mepo6g00486 340 PANTHER OS01G0253100 PROTEIN 46 330 - -
Mepo6g00486 340 FunFam Receptor protein kinase CRINKLY4 142 335 - -
Mepo6g00486 340 Gene3D Phosphorylase Kinase; domain 1 28 140 - -
Mepo6g00486 340 FunFam serine/threonine-protein kinase-like protein ACR4 30 140 - -
Mepo6g00486 340 Pfam Protein tyrosine and serine/threonine kinase 66 328 IPR001245 GO:0004672|GO:0006468
Mepo6g00486 340 Gene3D Transferase(Phosphotransferase) domain 1 142 336 - -
Mepo6g00486 340 SUPERFAMILY Protein kinase-like (PK-like) 39 328 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00486 Mepo-Chr6 4978937 4980136 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00486 40 329 Receptor kinase-like Gene Family AT3G59420 36.513 6.84e-49 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mepo6g00486 PK_Tyr_Ser-Thr 9.1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00486 - - mtr:11441273 627.476