Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00484 ATGCTTCCTCTTCTTCCCTTTCTCCTCCTCCTCCTCCTCCTCCAACCACTAACCATTCTCTCTCTCAACCAAGAAGGTTTCTACCTACACCAATTCAAACTCTCCTTAGACGATCCATCCTCTTCCTTATCCACATGGAACAACAACACCTCAACACCTTGTACCTGGTCCGGCATAACCTGCGACCCAACAAACACAACTGTAACAAAAATCAACCTCTCTAACTTCAACCTAGCTGGTCCCTTACAAACCTCAACCCTCTGCCGTCTCACAAACTTAACCACCCTTATCCTAACAAACAACTTAATAAACCAAACACTTCCTTTAGATATTTCTACTTGCACCTCCCTTACTCATTTAGACCTCTCTAACAATCTTCTCATTGGTACACTCCCCCATACACTACCACACCTCCCTAACCTCCGTTATCTTGATTTAACAGCAAACAACTTCTCCGGCTCAATCCCAACCTCATTCGGAACATTTCCCAAACTACAAGTGCTTTCACTCGTTTACAATCTTCTAGAATCTTCTATTCCACCTTCACTCGCAAACATTACCTCTTTGAAAACACTCAATCTATCATTTAACCTTTTTCAACCTTCTCCGATCCCGCCGGAGATCGGAAACCTAACTAACCTTGAAGTTCTATGGCTTAGTTCATGTAATCTTGTCGGTAATATTCCTCATTCGTTTTCAAAATTGAAGAAACTTAGTGTTTTTGATCTTTCTATGAATAATCTCCAAGGTTCTATTCCGAGTTCGATTGTTCAAATGACGAGTTTGAAGCAGATTGAGCTTTATAACAACTCGTTTTCCGGCGAGTTACCGGTGGGAATGTCGAATCTTACTTCGTTGAGGTTGATTGATATTTCTATGAACCATATTGGTGGTGAAATTCCTGATGAATTGTGTAGATTACCTCTTGAAAGTCTTAATTTGTTTGAGAATAGGTTTACCGGTGAGTTGCCGGTGAGTATAGCTGATTCGCCGAATCTTTATGAGTTAAAGGTTTTTGAGAATTTGCTCACCGGTGAGCTACCGGAGAAGCTAGGGAAGAATGGTCCGTTGATATATTTTGATGTTTCGAATAATAAGTTTTCTGGTAAGATTCCGGTGAGTTTGTGTGAGCGTGGTGCGTTGGAGGAGTTATTGATGATACATAATGAATTCTCTGGTGAGATTCCGGGGAGTTTAGGGGAGTGTCGGACATTGACGCGTGTTAGGTTGGGTTTTAATAAGCTGTCTGGGGAAGTTCCGGCGGGTTTTTGGGGTCTGCCACATGTTTATCTTCTTGAGCTTGTTGATAACTTGTTTTCTGGTTCAATTGGTAAGACTATTGGTGGAGCTGGGAATTTGTCTCAGTTGGCTTTGTCGAATAATAATTTCTCTGGTGTGATTCCTGAAGAGATTGGATTGTTGGAAAATCTTCTGGAATTTTCGGGTGGTAATAACCGGTTTAATTCTTCATTGCCTGATAGTCTTGTGAATCTTCATCAGCTTGGGATTCTTGATCTTCACAAGAATAATCTTTCTGGGGAGCTTCCAAAAGGGATTCAATCTCTTAAGAAACTCAATGAGTTGAATTTGGCTGGTAATGAGATTGGTGGGAAAATTCCTGAAGAAATTGGAAGTATGTCTGTGCTTAACTTTCTTGATCTTTCTAATAATCGATTTTGGGGAAATGTTCCGGAGAGTTTGCAGAACTTGAAGCTCAATCAGATGAATTTGTCTCACAATATGCTTTCTGGAAAGATTCCACCTCTTATGGCTAAGGATATGTATAGGGATAGTTTTATTGGTAATCCTGGTTTGTGTGGAGATTTGAAAGGTTTGTGTGATGTCAAAGGGGAGGGTAAGAGTAAAAATTTTGTTTGGTTGCTTAGGACTATTTTCATAGTTGCAGCTTTAGTTTTAGTCTTTGGTTTGATTTGGTTTTACTTCAAGTACATGAATATCAAGAAAGCTAGATCTATTGATAAAACAAAATGGACATTGATGTCGTTTCATAAACTGGGTTTTGGTGAAGATGAGGTCCTGAATTGCCTTGATGAAGATAATGTCATAGGAAGTGGATCTTCCGGGAAAGTTTATAAGGTCGTGCTTCGCAACGGGGAAGCTGTTGCTGTGAAGAAGATATGGGGTGGGGTCAGAATGGAAACCGAGAGTGGAGATGTTGAAAAGAACCGATTTCAAGATGATGCTTTTGATGCAGAGGTTGAAACTTTGGGCAAGATCAGACACAAGAACATTGTCAAGCTATGGTGTTGTTGTACCACAAGGGATTGCAAGCTATTGGTTTATGAGTATATGCCAAATGGTAGTCTTGGTGATTTGCTGCATAGTAATAAAGGAGGGTTGTTGGATTGGCCAACTAGGTATAAGATAGCTCTTGCTTCTGCAGAAGGCCTCTCTTATCTGCATCATGACTGTGTTCCTCCTATTGTTCATCGAGATGTCAAATCTAATAACATCTTGTTGGATGAAGACTTTAGCGCAAGGGTCGCAGATTTTGGGGTAGCTAAGGCGGTCGAATCCAATGGGAAAGGAACTAAGTCCATGTCTGTCATCGCTGGCTCTTGTGGGTATATCGCACCAGAGTATGCATACACACTTAGAGTGAATGAGAAGAGTGACACATACAGTTTTGGTGTTGTTATCCTCGAGTTAGTCACCGGAAGGAAGCCAATAGATCCTGAATTTGGGGAAAAAGACTTGGTTATGTGGGCATGCAACACCTTGGATCAGAAAGGTGTTGACCATGTTCTTGACTCAAGGCTTGATTCTTTTTACAAAGAAGAAATTTGCAAGGTCCTTAACATTGGCCTAATGTGCACTAGTCCTCTTCCAATTAACCGGCCTGCAATGAGAAGAGTGGTGAAGATGTTACAAGAAGTTGGTCCAGAAAGCCAAACAAAGTCTTCCCAGAAAGATGGAAAGCTGTCCCCTTATTACTATGATGATGGATCAGACCAAGGAAGTGTTGCTTAA 2991 0.4096 MLPLLPFLLLLLLLQPLTILSLNQEGFYLHQFKLSLDDPSSSLSTWNNNTSTPCTWSGITCDPTNTTVTKINLSNFNLAGPLQTSTLCRLTNLTTLILTNNLINQTLPLDISTCTSLTHLDLSNNLLIGTLPHTLPHLPNLRYLDLTANNFSGSIPTSFGTFPKLQVLSLVYNLLESSIPPSLANITSLKTLNLSFNLFQPSPIPPEIGNLTNLEVLWLSSCNLVGNIPHSFSKLKKLSVFDLSMNNLQGSIPSSIVQMTSLKQIELYNNSFSGELPVGMSNLTSLRLIDISMNHIGGEIPDELCRLPLESLNLFENRFTGELPVSIADSPNLYELKVFENLLTGELPEKLGKNGPLIYFDVSNNKFSGKIPVSLCERGALEELLMIHNEFSGEIPGSLGECRTLTRVRLGFNKLSGEVPAGFWGLPHVYLLELVDNLFSGSIGKTIGGAGNLSQLALSNNNFSGVIPEEIGLLENLLEFSGGNNRFNSSLPDSLVNLHQLGILDLHKNNLSGELPKGIQSLKKLNELNLAGNEIGGKIPEEIGSMSVLNFLDLSNNRFWGNVPESLQNLKLNQMNLSHNMLSGKIPPLMAKDMYRDSFIGNPGLCGDLKGLCDVKGEGKSKNFVWLLRTIFIVAALVLVFGLIWFYFKYMNIKKARSIDKTKWTLMSFHKLGFGEDEVLNCLDEDNVIGSGSSGKVYKVVLRNGEAVAVKKIWGGVRMETESGDVEKNRFQDDAFDAEVETLGKIRHKNIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSNKGGLLDWPTRYKIALASAEGLSYLHHDCVPPIVHRDVKSNNILLDEDFSARVADFGVAKAVESNGKGTKSMSVIAGSCGYIAPEYAYTLRVNEKSDTYSFGVVILELVTGRKPIDPEFGEKDLVMWACNTLDQKGVDHVLDSRLDSFYKEEICKVLNIGLMCTSPLPINRPAMRRVVKMLQEVGPESQTKSSQKDGKLSPYYYDDGSDQGSVA 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00484 996 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 232 965 - -
Mepo6g00484 996 FunFam Receptor-like protein kinase HSL1 308 615 - -
Mepo6g00484 996 Gene3D Transferase(Phosphotransferase) domain 1 771 989 - -
Mepo6g00484 996 Gene3D Ribonuclease Inhibitor 22 178 IPR032675 -
Mepo6g00484 996 Gene3D Ribonuclease Inhibitor 278 376 IPR032675 -
Mepo6g00484 996 Pfam Leucine rich repeat 213 271 IPR001611 GO:0005515
Mepo6g00484 996 Pfam Leucine rich repeat 139 198 IPR001611 GO:0005515
Mepo6g00484 996 Pfam Leucine rich repeat N-terminal domain 23 62 IPR013210 -
Mepo6g00484 996 SMART LRR_typ_2 283 307 IPR003591 -
Mepo6g00484 996 SMART LRR_typ_2 235 259 IPR003591 -
Mepo6g00484 996 SMART LRR_typ_2 522 546 IPR003591 -
Mepo6g00484 996 SMART LRR_typ_2 90 114 IPR003591 -
Mepo6g00484 996 SMART LRR_typ_2 498 521 IPR003591 -
Mepo6g00484 996 SMART LRR_typ_2 138 161 IPR003591 -
Mepo6g00484 996 SMART LRR_typ_2 186 211 IPR003591 -
Mepo6g00484 996 SMART LRR_typ_2 162 185 IPR003591 -
Mepo6g00484 996 Gene3D Ribonuclease Inhibitor 179 277 IPR032675 -
Mepo6g00484 996 MobiDBLite consensus disorder prediction 965 996 - -
Mepo6g00484 996 SUPERFAMILY RNI-like 70 416 - -
Mepo6g00484 996 ProSitePatterns Protein kinases ATP-binding region signature. 689 712 IPR017441 GO:0005524
Mepo6g00484 996 FunFam Leucine-rich receptor-like protein kinase family protein 204 302 - -
Mepo6g00484 996 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 771 980 - -
Mepo6g00484 996 ProSitePatterns Serine/Threonine protein kinases active-site signature. 815 827 IPR008271 GO:0004672|GO:0006468
Mepo6g00484 996 SUPERFAMILY Protein kinase-like (PK-like) 679 963 IPR011009 -
Mepo6g00484 996 Pfam Protein kinase domain 685 900 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00484 996 Gene3D Ribonuclease Inhibitor 377 613 IPR032675 -
Mepo6g00484 996 Gene3D Phosphorylase Kinase; domain 1 668 770 - -
Mepo6g00484 996 SMART serkin_6 683 985 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00484 996 FunFam Receptor-like protein kinase HSL1 667 770 - -
Mepo6g00484 996 Pfam Leucine Rich Repeat 116 138 IPR001611 GO:0005515
Mepo6g00484 996 ProSiteProfiles Protein kinase domain profile. 683 985 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00484 996 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 22 186 - -
Mepo6g00484 996 SUPERFAMILY L domain-like 381 606 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00484 Mepo-Chr6 4964919 4969143 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00484 18 996 Receptor kinase-like Gene Family AT1G28440 66.531 0.0 1343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mepo6g00484 Pkinase 2.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00484 - - gmx:100776936 1499.18