Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00481 ATGGAAGCTGAAGCAGAGAATAATTCCCAGAAGGGTGATGATGGGGGTGAAAATAGTAATGAAAATTTCAACAACAATGGAAGTAACAACAAGATTATGAGTTCAAGTGAAGGTCAAAGCAAACCTAAGAGACAGATGAAAACCCCTTTTCAGCTTGAAATGCTTGAGAAAGCTTATGCTTTGGAGACATATCCTTCAGAGACAACAAGGATAGAGCTGTCTGAGAAGTTGGGGTTGTCGGATCGACAGTTACAGATGTGGTTTTGTCACCGGAGGTTGAAAGACAAGAAGGAGTTACCGGTTAAGAAGGCGCGAAAGGCGCCACCTTTGCTGGATTCTCCTACTCACGAGCCTAATCCTAAGTTGATTCTGGAGCCTTGTAATGAATATGGATCCGGGTCAGGTTCTGGGTCTAGCCCGTTTGCCCGGACGGAGTTGAGGAATGTGGTGCCACCTCCAAGGAGTTATTATGAGTCACCACAGACTATAATGGAGCTTAGAGCAATTGCTTGTGTGGAGGCACAGTTAGGGGAGCCTTTGAGGGAAGATGGACCTATTTTGGGAATTGAGTTTGATCCATTGCCACCTGATGCATTTGGGGCACCCTTAGCTGTTGCAGAACAGCAGAAGCGGCCTAGTCTTGCCTATGACAGTAAAATATACGAAAGACATGAAGTTAGAACGAATAAGGCAATGGCAAGGACATTCCCTGAATATCCGTTTGTTCCGAACCAGCCTAGCATTAGATCTGATATGTTTGGACAATTGAGTCAACCCCATTTATACGATCCAATGGAGGGTCCTACCAGAACTCCTCCTTTTCCGATTGGAAATGAACATCTACCTAGAATTCATGGAACTCAAAGTCATTCTTCCCGTGCTCGCCTATCGTCTCAACAGGACAAGCCAGTGACTCCCTATGCTTCCCCTCCTCCCTTTTTGTCTCAGCAAGACAAGCAATCAATTCCCTATCCATCTCCTCCTCGAGATAATGATGTTGTCCCCAAAAGGGAACCTCACCCAAACATAGCCAATACTGGCATTAACTCCCAATTCACTGATCACCAAATTGGTGGACAAGAAAATCCTTTAGCTTTACCTGGTGGACAAGTTTTCCATAATGACACGGTCTTGCGGGTGGAGAAGAAACGAAAGACCGACGATGCCAGAGTTGCCAAGGAAGTTGAAGCCTATGAAATAAGGATGAAGAAAGAACTTGAGAAACAAGATATCCTAAGAAGAAAGAATGAAGAGCGAATGAGGAAAGAAATGGAAAGGCTAGATCGTGAGAGAAGGAAGGAAGAAGAAAGGATGATGCGTGAGAGGCAGAGAGAAGAGGAAAGATTGAAGCGTGAGCAAAGGCGGGAGATAGAACGAAGGGAAAAATATATGATGAAAGAACATTTAAGAGCTGAGAAAAGGAAGCAAAAAGAAGAGATTCGCAAAGAGAAAGAGGCAGAGAGAAGGAAAGCTGCCCTTGAAAAGGCAAATGCTCGTAGAATAGCTAAAGAGTCTACGGAGCTCATTGAGGATGAACAGTTAGAATTGATGGAATTGGCGGCAGCAAGCAAGGGGCTTTCCTCTATCATCCATATTGATCTTGATACTTTGCAAAACCTTGAATCATTTAGGGATTCCTTGTGTGTTTTCCCGCCCAAAAGTGTAAAGCTAAAAAAACCATTTGCTATCCAGCCCTGGTTCAACTCGGAACAAGATGTTGGCAACCTTCTCATGGTTTGGAGATTCTTGATTACCTTTGCTGATGCTCTTGAGTTATGGCCTTTTACTCTTGATGAATTTGTACAAGCATTTCATGATTATGATTCAAGATTGTTGGGTGAGATACATGTTGCTGTTCTTAAAATGATAATAAAAGACATTGAAGATGTTGCAAGGACACCTTCTACAGGATTAGGAGTGAACCAGAATGGAGCTGCTAATCCTGCCGGTGGCCATCCAGAGATTGTGGAAGGAGCATATACATGGGGCTTTGACATACGAAATTGGCAGAAGAACTTAAATCAGTTGACATGGCCTGAAATTTTGCGACAGTTAGCACTATCTGCAGGATTTGGACCACAGTTGAAAAAAAGAAGTATTACCTGGTCCTGTGCAAATGATAAAGAAGAGGGAAGAAGTGGTGATGATGTCATTTCTACACTTCGTAATGGTTCAGCAGCTGTAAGTGCAGTGGCAAAAATGCGAGAGAAAGGTTTATTAGCTCCTCGAAGATCGAGACACAGGTTAACTCCAGGAACAGTTAAATTTGCAGCATTTCATGTTCTCTCTCTTGAGGGCCCCAAAGGTTTGAATGTGCTAGAGCTTGCAGAGAAGATTCAGAAATCTGGTCTTCGGGACCTAACAACCAGCAAGACACCTGAAGCATCAATTTCGGTTGCTTTAACAAGAGATGGCAAACTTTTCGAAAGAATAGCTCCATCAACATATCGTGTACGAACTGCATTTAGACAGGATCCTGCAGATGCTGAGTCCATTCTTTCAGAAGCAAGAAAGAAAATCCAAATATTTGAAAATGGGTTTCTAGCTGGTGAAGATGTCGTTGATGTTGAAAGAGAAGAAGAGTCAGAAAGTGATGAAGTTGACGAGGATCCTGAAGACGATGATTTGGTAAATCCTTCAAGTGGAAACCAAAATTCAGAACAATACGATAATATGAATATTAGCTTGGTAAATGTAAAAGAAAATTTGGGCAATGATGTAGACCTTATTCAAAATAAGCTTGATACTGATCTGCCTTGTTTTCCTGAGAATGGTTCCAAGGATGCCGATTGTCCCACTTCTGTCACCAGACAACCAGTTGCTTGTGAAAATCTAAATACTGGAAATCTTGATGATAATATGGAAATCGATGAAAGCAAGTCTGGAGAACCATGGGTTCAAGGACTTACTGAAGGAGAATACTCTGATCTCAGTGTAGAAGAGCGTCTAAACGCTCTTGTTGCATTGGTTGGTGTGGCAAATGAAGGAAATTCAATCCGAATTATTCTTGAGGATCGATTGGAAGCAGCAAATGCTCTGAAAAAGCAAATGTGGGCTGAAGCACAAATAGATAAAGTTCGTCTGAAAGATGATTATATTAGTAAATTAGATTTCCCCTCACTTGCTGGAAATAAATTTGAAACACAAGACACATATCCTGCTGTGGAGGGAAATCAAAGCCCATTGCTCGACATCAATATTAACAACATTAAGAATGAAGCATCACCCAGCACTGCAGAAAACCAAAGAGGAACTCCTTCTGCACAGAGTCTACTTATTGAAAAGCCATTGGTAGCTCATGATTTCTGCCCAGGCACAGGTCCAGACAACTCTCATAGTCAGATGCATGCACAATATTCAAAAAGGTCACGATCACAGTTAAAATCTTATATTTCCCACATAGCCGAGGAGATGTATGTCTACAGGTCTCTACCCCTTGGCCAGGACCGCAGGCGTAACCGATATTGGCAGTTTGTTGCATCTGCTTCTAGTAATGATCCTGGTTCTGGCAGGATCTTTGTTGAACATCATGATGGCAGTTGGAGGCTTATTGATTCTGAAGAGGCCTTTGATATTCTTTTGACATCACTGGATTCACGCGGGATCAGGGAGTCTCATTTGCGCTTGATGTTGCAAAAGATTGAGAAATCCTTTAAAGAAAATGTTCGAAAAAATACACAATATACAAAAATTGGAAGCAAAGGGGAAGGTTCTATGAAAACTGAAGCTGATGAAGCATATCCAGTGCCTGAGCGCCATTCAGGATCTGGCAGTCCTAGCAGTACCCTTCATGAGTTGAACTCTCGTACATCTGAAACTTCATCATCCTTCAAAATTGAGCTTGGCAAAAGTGAGAATGAAAAGAAAGCTGCCTTGAGAAGGTATCAAGATTTTCAGAAGTGGATGTGGAAAGAATGCTATAATTCATCAATTTTATGTGCAATAAAATTTGGGGTAAAGAGATGCAAACCTCAGGTGGATATTTGTGAAATCTGTCTCGATCCTTATTTTATGGAAGACTCCCATTGCAATTCCTGCCACCAAACATTTCCATCAAATAATGAATTTAATTTTTCTAAACACACATTTCAGTGTGTTGGCAATTTATCCAAAGATATTATGGAACATTCTCTTCCTCTGAGGACAAGATTGCTTAAGGTCCTGCTGTCATGTATGGAGGCATCTGTTCTCTCTGAAGCATTCGGAACAATTTGGACAACTGATTTTAGGAAGCATTGGGGTGTGAAGTTGAGTAAATCATCATCCGTGGAGGAACTTTTACAGATGTTGACCCTATTTGAAAAAGCGCTACGGCGTGATTTTTTGTCATCAAACTTCTCTACAACAGACGAATTGTTGGGATTAAGCAGTATGTCAAAAAGTGCTGCACATGTGTCTGCTGATCCTGAATCAGTTGCTCTACTTCCATGGGTTCCACTAACCACTGCAGCATTGTCTCTCAGGCTTTTTGAGTTTGATTCATCCATCAGCTATGTAAAGCTTGAGAGACTTGAGCCTGTTGAGGAGAAAGAAGCAACAGAATACATTCAGAGGCTTCCATCAAGATATACTCCCTTCAAGCCTAACAGAGAGTTTGAGGCAGCAGCTCTTGATCATGATGGATTCACCAAAGTTAAACCTTCTGCTAATAAAATTGCACGAAGTGGAAACAAGCGTGGGCGAGGAGCTAGTGATCTTGGACGGGGTAAAAAGCTGTCTAAAAGAATGTACAATTCCAAACAAGATACTGGCTGTCGAAACATTAAGGTCACCGAGAATCTAAGTCAGAAATTAAAACAGCAGGGACAGGGAACACAAGGACAAGGGGGTGGACGAGGTCGCCGAACGGTCAGAAAACGTAGAGTAGAAAAAAGAGCTGTTGAGGATTTGTTGCTGGGCCATGCAGCAGCCAGTCATAGTTCCAAGGGTGGAAGAGAACCATTGAGAAACTTGGATGAAGAATGGGATGTTGAAAAATTAAGTCCTATGACTCCTGTTCACATTGGGGTTGCTGAGAATAGTAACAGTGCTGAAGAGGTGGAATCTGATGATAATGCTCAAGCAGTGGAATCCGATGATGATGCTCAAGCAGTGGAATCCGATGATGATGCTCAAGCAGTGGAATATGATCATGGAAATTGGGAGATAGGTTACAACGGTGTCTCCCCTAACAGATGGGATAGGGATTTGGTTGGAATGAGTGATGAAGATGTGGACAATTTTGAAGATGAAGAAGACAATGGCAATGATAATGTTAATGACATCGGCATTGGCTTTGAAGAGAATGAAGAGGAAGATTCTGAGGAAGATGTTATGAGTGAAGGTTCGGATGGAATGCTGAATAGAGTAGTGAATGTAGGGGGCTCCGAAGATGTTATGAGTGAAGATTCTTCTGATTAG 5400 0.4202 MEAEAENNSQKGDDGGENSNENFNNNGSNNKIMSSSEGQSKPKRQMKTPFQLEMLEKAYALETYPSETTRIELSEKLGLSDRQLQMWFCHRRLKDKKELPVKKARKAPPLLDSPTHEPNPKLILEPCNEYGSGSGSGSSPFARTELRNVVPPPRSYYESPQTIMELRAIACVEAQLGEPLREDGPILGIEFDPLPPDAFGAPLAVAEQQKRPSLAYDSKIYERHEVRTNKAMARTFPEYPFVPNQPSIRSDMFGQLSQPHLYDPMEGPTRTPPFPIGNEHLPRIHGTQSHSSRARLSSQQDKPVTPYASPPPFLSQQDKQSIPYPSPPRDNDVVPKREPHPNIANTGINSQFTDHQIGGQENPLALPGGQVFHNDTVLRVEKKRKTDDARVAKEVEAYEIRMKKELEKQDILRRKNEERMRKEMERLDRERRKEEERMMRERQREEERLKREQRREIERREKYMMKEHLRAEKRKQKEEIRKEKEAERRKAALEKANARRIAKESTELIEDEQLELMELAAASKGLSSIIHIDLDTLQNLESFRDSLCVFPPKSVKLKKPFAIQPWFNSEQDVGNLLMVWRFLITFADALELWPFTLDEFVQAFHDYDSRLLGEIHVAVLKMIIKDIEDVARTPSTGLGVNQNGAANPAGGHPEIVEGAYTWGFDIRNWQKNLNQLTWPEILRQLALSAGFGPQLKKRSITWSCANDKEEGRSGDDVISTLRNGSAAVSAVAKMREKGLLAPRRSRHRLTPGTVKFAAFHVLSLEGPKGLNVLELAEKIQKSGLRDLTTSKTPEASISVALTRDGKLFERIAPSTYRVRTAFRQDPADAESILSEARKKIQIFENGFLAGEDVVDVEREEESESDEVDEDPEDDDLVNPSSGNQNSEQYDNMNISLVNVKENLGNDVDLIQNKLDTDLPCFPENGSKDADCPTSVTRQPVACENLNTGNLDDNMEIDESKSGEPWVQGLTEGEYSDLSVEERLNALVALVGVANEGNSIRIILEDRLEAANALKKQMWAEAQIDKVRLKDDYISKLDFPSLAGNKFETQDTYPAVEGNQSPLLDININNIKNEASPSTAENQRGTPSAQSLLIEKPLVAHDFCPGTGPDNSHSQMHAQYSKRSRSQLKSYISHIAEEMYVYRSLPLGQDRRRNRYWQFVASASSNDPGSGRIFVEHHDGSWRLIDSEEAFDILLTSLDSRGIRESHLRLMLQKIEKSFKENVRKNTQYTKIGSKGEGSMKTEADEAYPVPERHSGSGSPSSTLHELNSRTSETSSSFKIELGKSENEKKAALRRYQDFQKWMWKECYNSSILCAIKFGVKRCKPQVDICEICLDPYFMEDSHCNSCHQTFPSNNEFNFSKHTFQCVGNLSKDIMEHSLPLRTRLLKVLLSCMEASVLSEAFGTIWTTDFRKHWGVKLSKSSSVEELLQMLTLFEKALRRDFLSSNFSTTDELLGLSSMSKSAAHVSADPESVALLPWVPLTTAALSLRLFEFDSSISYVKLERLEPVEEKEATEYIQRLPSRYTPFKPNREFEAAALDHDGFTKVKPSANKIARSGNKRGRGASDLGRGKKLSKRMYNSKQDTGCRNIKVTENLSQKLKQQGQGTQGQGGGRGRRTVRKRRVEKRAVEDLLLGHAAASHSSKGGREPLRNLDEEWDVEKLSPMTPVHIGVAENSNSAEEVESDDNAQAVESDDDAQAVESDDDAQAVEYDHGNWEIGYNGVSPNRWDRDLVGMSDEDVDNFEDEEDNGNDNVNDIGIGFEENEEEDSEEDVMSEGSDGMLNRVVNVGGSEDVMSEDSSD 1799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00481 1799 MobiDBLite consensus disorder prediction 1672 1702 - -
Mepo6g00481 1799 CDD homeodomain 43 98 IPR001356 GO:0003677
Mepo6g00481 1799 MobiDBLite consensus disorder prediction 1 49 - -
Mepo6g00481 1799 Gene3D - 40 98 - -
Mepo6g00481 1799 MobiDBLite consensus disorder prediction 1738 1799 - -
Mepo6g00481 1799 MobiDBLite consensus disorder prediction 1757 1773 - -
Mepo6g00481 1799 MobiDBLite consensus disorder prediction 854 876 - -
Mepo6g00481 1799 ProSiteProfiles DDT domain profile. 570 629 IPR018501 -
Mepo6g00481 1799 ProSiteProfiles 'Homeobox' domain profile. 38 98 IPR001356 GO:0003677
Mepo6g00481 1799 MobiDBLite consensus disorder prediction 426 451 - -
Mepo6g00481 1799 SMART HOX_1 40 102 IPR001356 GO:0003677
Mepo6g00481 1799 MobiDBLite consensus disorder prediction 1254 1280 - -
Mepo6g00481 1799 SMART testlast3 570 629 IPR018501 -
Mepo6g00481 1799 ProSiteProfiles HARE-type HTH domain profile. 752 821 IPR007759 GO:0006355
Mepo6g00481 1799 MobiDBLite consensus disorder prediction 102 144 - -
Mepo6g00481 1799 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1142 1214 IPR028941 -
Mepo6g00481 1799 SUPERFAMILY Homeodomain-like 28 97 IPR009057 -
Mepo6g00481 1799 Coils Coil 466 522 - -
Mepo6g00481 1799 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 18 1799 IPR044977 GO:0006357
Mepo6g00481 1799 MobiDBLite consensus disorder prediction 853 890 - -
Mepo6g00481 1799 MobiDBLite consensus disorder prediction 1677 1702 - -
Mepo6g00481 1799 Pfam HB1, ASXL, restriction endonuclease HTH domain 752 820 IPR007759 GO:0006355
Mepo6g00481 1799 Pfam Homeodomain 41 97 IPR001356 GO:0003677
Mepo6g00481 1799 MobiDBLite consensus disorder prediction 284 304 - -
Mepo6g00481 1799 Coils Coil 395 460 - -
Mepo6g00481 1799 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 960 1004 IPR028942 -
Mepo6g00481 1799 MobiDBLite consensus disorder prediction 1596 1610 - -
Mepo6g00481 1799 MobiDBLite consensus disorder prediction 12 46 - -
Mepo6g00481 1799 MobiDBLite consensus disorder prediction 1229 1280 - -
Mepo6g00481 1799 MobiDBLite consensus disorder prediction 1596 1650 - -
Mepo6g00481 1799 Pfam DDT domain 571 626 IPR018501 -
Mepo6g00481 1799 MobiDBLite consensus disorder prediction 263 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00481 Mepo-Chr6 4927008 4935766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00481 34 1719 Homeobox Transcription Factor Family AT1G28420 48.076 0.0 1300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Mepo6g00481 WSD 5.5e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00481 - - psat:127081735 2767.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g00481 6 4927008 4935766 Mepo6g00481 6 4927008 4935766 ECH
Mepo2g03234 2 41975334 41984487 Mepo6g00481 6 4927008 4935766 PCT