Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00480 ATGGGTTTGGACTACTATGAGATTTTGGAGGTTGACAAGAATGCCACAGATGATGAATTGAAGAAAGCATATAGAAAACTTGCCATGAAATGGCACCCTGACAAGAATCCTGACAATAAGAATGATGCTGAGACTAAATTCAAACTCATATCTGAAGCATATGAGGTTCTAAGTGATCCACAAAAGAGAGCAGTTTATGATCAATATGGAGAAAGCAGCCTTAAAAATGGAATGCCTACAACAGGTGACAGTGCAGCTCCATACTTCCAAACTCAGGATGGCAGAAGGTTTAGGTTCAATCCCAGAAGTGCGGATGGCATATTCGCAGAAGTTTTTGGCTTTTCAAGCCCTTATGGAGGAATGGGAATGAGGGGCGGCGGCTGCAGAGGCATGGGCATGAGAGGTCAGTCGTGGGTGTCCAGGTCTTTTGGCGATATTTTTGGCAAAGATGTATTTGGAGAAAGCAGACAAACGAGTCAAGCTCCAAGACGCAAGGCACCTCCCATTGAAAATAAGTTGCCTTGCAGCCTTGAGGAACTTTATAAAGGCACTACCAAAAAGATGAAGATCTCAAGGGAAATTGCATACGCAAGCGGCAAAACTGTACCTGTGGAGGAAATACTAACAATTGAAATCCAACCAGGCTGGAAAAAAGGAACGAAAATCACTTTCCCGGAGAAAGGAAATGAGCAACCAAATGTCATTGCTGCAGATATCGTATTCATTATTGACGAGAAACCTCACAATGTATTTACAAGACAAGGTAATGATTTGGTTATGACACAAAAGATATTACTTGCAGAAGGAGAAGCTCTAAGCAGAAGCTATACCTTCCAACTTACTACTTTGGATGGAAGGGGTCTGACCATTGCTGTTGACAACGGAATTGATCCAACCTATGAAGAAGTGGTTGCCGGCGAAGGGATGCCAATTTCCAAAAATCCTTCACAGAGGGGTAATCTTAGGATCAAATTCGACATCACATTCCCTAGCATGGTTGATGCTGAAACAGAAAGCCAGAACTAA 1026 0.4259 MGLDYYEILEVDKNATDDELKKAYRKLAMKWHPDKNPDNKNDAETKFKLISEAYEVLSDPQKRAVYDQYGESSLKNGMPTTGDSAAPYFQTQDGRRFRFNPRSADGIFAEVFGFSSPYGGMGMRGGGCRGMGMRGQSWVSRSFGDIFGKDVFGESRQTSQAPRRKAPPIENKLPCSLEELYKGTTKKMKISREIAYASGKTVPVEEILTIEIQPGWKKGTKITFPEKGNEQPNVIAADIVFIIDEKPHNVFTRQGNDLVMTQKILLAEGEALSRSYTFQLTTLDGRGLTIAVDNGIDPTYEEVVAGEGMPISKNPSQRGNLRIKFDITFPSMVDAETESQN 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00480 341 Gene3D - 168 246 - -
Mepo6g00480 341 Pfam DnaJ C terminal domain 169 330 IPR002939 -
Mepo6g00480 341 Pfam DnaJ domain 4 67 IPR001623 -
Mepo6g00480 341 FunFam Dnaj homolog subfamily b member 165 246 - -
Mepo6g00480 341 CDD DnaJ 4 59 IPR001623 -
Mepo6g00480 341 SMART dnaj_3 3 62 IPR001623 -
Mepo6g00480 341 Gene3D - 248 331 - -
Mepo6g00480 341 PRINTS DnaJ domain signature 24 39 IPR001623 -
Mepo6g00480 341 PRINTS DnaJ domain signature 62 81 IPR001623 -
Mepo6g00480 341 PRINTS DnaJ domain signature 42 62 IPR001623 -
Mepo6g00480 341 PRINTS DnaJ domain signature 6 24 IPR001623 -
Mepo6g00480 341 SUPERFAMILY Chaperone J-domain 4 73 IPR036869 -
Mepo6g00480 341 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 338 - -
Mepo6g00480 341 SUPERFAMILY HSP40/DnaJ peptide-binding domain 250 336 IPR008971 GO:0006457|GO:0051082
Mepo6g00480 341 FunFam DnaJ subfamily B member 13 248 331 - -
Mepo6g00480 341 FunFam DnaJ subfamily B member 13 3 122 - -
Mepo6g00480 341 CDD DnaJ_C 167 331 - -
Mepo6g00480 341 Gene3D DnaJ domain 3 121 IPR036869 -
Mepo6g00480 341 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Mepo6g00480 341 SUPERFAMILY HSP40/DnaJ peptide-binding domain 163 259 IPR008971 GO:0006457|GO:0051082
Mepo6g00480 341 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00480 Mepo-Chr6 4923508 4925964 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00480 5 69 C2H2 Transcription Factor Family AT1G74250 40.580 6.48e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00480 K09510 - gmx:100794650 466.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g00480 6 4923508 4925964 Mepo6g00480 6 4923508 4925964 ECH