Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00479 ATGGGGGTAGACTACTACAAGATTTTGAAGGTTGACAAGAATGCCACTGAAGAAGAGTTGAAGAAAGCTTACAGAAAACTTGCCATGAAGTGGCACCCTGATAAGAATCCCTCAAATAAGAAAGACGCTGAAGCCAAATTCAAAGAGATATCCGAAGCCTATGAGGTTCTAAGTGATCCACAAAAGAAAGCAATTTATGATCAATATGGAGAAGAAGGGCTAAAAGGGCAAGTACCACCACCTCAAGATACTGCTGGTGGTGCTACATTCTTCCAAAATGGAGATGGCCCAACAACAACATTTAGGTTTAATCCAAGAAACGCAAATGATATCTTCGCAGAGTTTTTCGGGTTTTCAAGCCCGTTTGGTGGAAATGGTATGAGAGGTGGTGGAGCAAGGTCCTTCGGTGGAATGTTTGGTGCTGATGATCACATGTTTTCTTCATTTGATGAAGCTAGGCCTATGCGTCAGCAGGGTCCTCGTAAGGCTGCTGCTATTGAAAACAGATTGCCTTGTAGTCTTGAGGAGCTCTATAAAGGGACTACCAAAAAGATGAAGATTTCAAGGGAAATTGCAGACGCAAGTGGGAAAACTATGCCAGTGGAGGAAATCCTAACAATTGAAGTAAAACCCGGTTGGAAAAAGGGTACAAAAATCACATTCCCTGAGAAAGGAAATGAGCAACCAAATGTGATACCAGCAGATCTTATATTTGTTATTGATGAGAAACCACATGGTGTATTTACAAGAGATGGCAATGATTTGGTTGCAACACAGAAGATATCACTTGCAGAAGCTTTAACAGGCTACACTGTTCGTCTCACAACACTAGATGGCAGGGTTCTGAATGTTCCTATTAACAATGTGATTCATCCAAGCTATGAAGAGGTTGTTCCAAAGGAAGGTATGCCTATTCCAAAAGATCCTTCAAAGAAGGGTAATCTTAGGATCAAATTTAATATCAAGTTTCCAGCTAGGTTGACTTCTGAACAGAAAGTTGGAATCAAGAAACTTCTGGCACCATAG 1026 0.4103 MGVDYYKILKVDKNATEEELKKAYRKLAMKWHPDKNPSNKKDAEAKFKEISEAYEVLSDPQKKAIYDQYGEEGLKGQVPPPQDTAGGATFFQNGDGPTTTFRFNPRNANDIFAEFFGFSSPFGGNGMRGGGARSFGGMFGADDHMFSSFDEARPMRQQGPRKAAAIENRLPCSLEELYKGTTKKMKISREIADASGKTMPVEEILTIEVKPGWKKGTKITFPEKGNEQPNVIPADLIFVIDEKPHGVFTRDGNDLVATQKISLAEALTGYTVRLTTLDGRVLNVPINNVIHPSYEEVVPKEGMPIPKDPSKKGNLRIKFNIKFPARLTSEQKVGIKKLLAP 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00479 341 SUPERFAMILY HSP40/DnaJ peptide-binding domain 167 245 IPR008971 GO:0006457|GO:0051082
Mepo6g00479 341 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 339 - -
Mepo6g00479 341 CDD DnaJ 4 59 IPR001623 -
Mepo6g00479 341 SUPERFAMILY Chaperone J-domain 3 124 IPR036869 -
Mepo6g00479 341 Pfam DnaJ domain 4 67 IPR001623 -
Mepo6g00479 341 Gene3D - 245 324 - -
Mepo6g00479 341 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Mepo6g00479 341 FunFam DnaJ subfamily B member 13 3 126 - -
Mepo6g00479 341 FunFam Dnaj homolog subfamily b member 162 243 - -
Mepo6g00479 341 Pfam DnaJ C terminal domain 166 324 IPR002939 -
Mepo6g00479 341 Gene3D DnaJ domain 3 127 IPR036869 -
Mepo6g00479 341 CDD DnaJ_C 166 327 - -
Mepo6g00479 341 SMART dnaj_3 3 62 IPR001623 -
Mepo6g00479 341 Gene3D - 164 243 - -
Mepo6g00479 341 SUPERFAMILY HSP40/DnaJ peptide-binding domain 247 332 IPR008971 GO:0006457|GO:0051082
Mepo6g00479 341 Coils Coil 6 26 - -
Mepo6g00479 341 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Mepo6g00479 341 FunFam DnaJ subfamily B member 13 245 325 - -
Mepo6g00479 341 PRINTS DnaJ domain signature 42 62 IPR001623 -
Mepo6g00479 341 PRINTS DnaJ domain signature 62 81 IPR001623 -
Mepo6g00479 341 PRINTS DnaJ domain signature 24 39 IPR001623 -
Mepo6g00479 341 PRINTS DnaJ domain signature 6 24 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00479 Mepo-Chr6 4919075 4921148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00479 5 69 C2H2 Transcription Factor Family AT1G74250 39.130 4.54e-10 58.9