Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00469 ATGGCGCCGAAAGTAGTTAAGAACGGTGGCGCTAACGTGAACAATAACGGCGGCGTTAAGGAGGCGCATTTTAGAGGAGTAAGAAAGAGACCATGGGGAAGATACGCCGCAGAGATAAGAGATCCAGGAAAGAAAAGCCGCGTTTGGCTCGGAACGTTTGACACGGCGGAGGAAGCAGCAAGAGCTTACGACTCCGCCGCACGTCAATTCCGAGGTCCAAAGGCGAAAACAAACTTCCCTTTCCCTATAGAAAATGTTAAGATCCATAGCCCTAGCCAAAGCAGCACCGTTGAATCCTCAAGCCGTGACCGTGACGTCGCCGCTGATTCTTCTCCCCTTGATCTCAACTTAGCTCCTGCGAGTGCTTTCCAGCACCGGTTCACTCCGATGCCGGCGGTTAACCAGACGTTTTGTTTTGACGCTGTGTTACGTGCCGGCATGGTGAATTCACGTTCTAGTTACGGTTATGGATTTGAATATAATCCTCCTATGGAGGCGAGTGGATTCCACGCGACGGTTGGTGCACAGAGTGATTCAGATTCTTCTTCTGTGATTGATCTAAACCACCATGGTAGAAGCTTCGATTTCGATCTTAACTACCCTCCTTTGGAAGATATGCTATGA 624 0.4968 MAPKVVKNGGANVNNNGGVKEAHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDSAARQFRGPKAKTNFPFPIENVKIHSPSQSSTVESSSRDRDVAADSSPLDLNLAPASAFQHRFTPMPAVNQTFCFDAVLRAGMVNSRSSYGYGFEYNPPMEASGFHATVGAQSDSDSSSVIDLNHHGRSFDFDLNYPPLEDML 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00469 207 CDD AP2 22 80 IPR001471 GO:0003700|GO:0006355
Mepo6g00469 207 SUPERFAMILY DNA-binding domain 23 81 IPR016177 GO:0003677
Mepo6g00469 207 ProSiteProfiles AP2/ERF domain profile. 23 80 IPR001471 GO:0003700|GO:0006355
Mepo6g00469 207 FunFam Ethylene-responsive transcription factor 2 22 81 - -
Mepo6g00469 207 Pfam AP2 domain 23 72 IPR001471 GO:0003700|GO:0006355
Mepo6g00469 207 MobiDBLite consensus disorder prediction 85 110 - -
Mepo6g00469 207 PRINTS Ethylene responsive element binding protein signature 24 35 IPR001471 GO:0003700|GO:0006355
Mepo6g00469 207 PRINTS Ethylene responsive element binding protein signature 46 62 IPR001471 GO:0003700|GO:0006355
Mepo6g00469 207 MobiDBLite consensus disorder prediction 87 101 - -
Mepo6g00469 207 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 17 152 - -
Mepo6g00469 207 SMART rav1_2 23 86 IPR001471 GO:0003700|GO:0006355
Mepo6g00469 207 Gene3D AP2/ERF domain 22 81 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00469 Mepo-Chr6 4823471 4824578 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00469 9 89 AP2-EREBP Transcription Factor Family AT5G44210 74.074 8.31e-39 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo6g00469 AP2 3.8e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00469 K09286 - gmx:100170742 250.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g00469 6 4823471 4824578 Mepo6g00469 6 4823471 4824578 ECH