Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00464 ATGCCAAATTCAGACTCTTCGGTAGAAGATGATCCATCACTTCAAGAAGAAGAGGAAGATGATGATGATGATGACGATGAAGAAGAAGAATACGAAGAAGTTGAAGTAGAAGAGGAAGAAGAAGATCAGGAAGAAGAGGAAATGGAAGAAGTTGAACAAGAAGAAGAAGAGGAGGAAGAAGTTGAAGAAGAAGAGGAAGAGGAAGAGGAGGAAGTTGAGGAGAAGGAGGAAGTAGAAACAGTAGTAGTGGTGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAGGAAGAAGAAGCAATAGAGAGTGAACATATCAAAGCTCATATAGTAGGGGCTGAATTGGAAGAACCTCAGAGGCTGCAACTGCCAAACTTCTGTAGTGTCCGACTTCAAACAATAAAGGTGGAAGAGGAGGAAGAGGAGGAGGAGGAAGAAGAAGAAGAAGAAGAAGAGGAAGAGGAAGAGGAGATGGAGAATGAGGAAAAACAAGAAAAAATAGTAGTAGAGGAGAAAGATAAAGACAAATATAAGGTTCCAAATTCTCTTCCCAATGCGGATAAACATAGCAAAGAAACAGTAGAGGTGGAAAAGGAGGAGGAGGAAGAAGAAAACGAAGAAGCAATAGACATGGAAGTGGAGGAAGAACAAGAAACAGTTGTAGAGGAGAAAGATAAAGAGAAAGATGAGGTTCCAGATTCTCTGCCCGATGCAGATAAACGTAGCAAAGATTCAAGCCAACATATGGAGCTTGATGTGAAAGAGGAGAACTTGGGGTCAATTTCCTATGTGCTCAAGAACCCTGAAGTAATACGGCCATCACATTATATGGAAGAGAATGATGCCATGAGTAAAGCATCTGTTCCATTGCATGAGGAATTGACATTGAAAAATGAAGATTATCCCCTGAAACAAAAGGTTTCTAGTCCTCCAAAATCAAGCGAAAACTTGATTTCTGCTGAAGATGGGAAAAATCAAGGCCTAAATGTTGATGTTGAAAATTCTGGACATCTTCAGGGGAAAACCTCTGAAGGATGCAGTGAACCAGATTGCAATAGCAAAGCTTCTTTATCTGATGTTAAAAACATTGATTCTAGGGCCACCAAGTCATCCAGTGATACGGGAAAAGATGTGGTTACTGGAATCATACTGAGAGATAATTTTGTTGAGGATGCTGATGGTGGTCAGAACTCTAAGGAGGAAGTTATGCAGTCAGAGATGGAGTCAAGGGTTGATGTGAAACAAAAGCCATCAAGGACTAGAAGTCTGTCTCCCAGTGCTGAGATTAAAGATGGAAACAAAAGACCTGCAATTATATGTGCTTTTTTTGCTAAAGGTTGGTGCATCCGAGGTAGTTCTTGTAGCTTCCTTCATGTAAAAGATAGTGTGAATAATACCGACCAGGGGGCTGAAGGAAACGTAGTTACTGCACATCAGAAGAGAGAATTGAAATTGGAAAAAGGTGTTAAGGAAAATGCTGACAGGTCAAGAACGAACGAGGAAGAAGCAAGTCCAAGTTGGCATCCATCTCATGAAAAAGAGAAGTTTCCGATGAGGGACAGCTTGTTTCCAGAGAATAAATCTGCATTTAATACATCAAACAATTATTTCAGCTCAAATCTTTCCTTATATTCATCCCGTGCAGAGGAAATGATTGCCATTCGAAACCATCATATGTACAGAGGATACACATCGACAAGAGATTTTAGTTCACCTTTAGGTGCAAGTGCTCTGGACTCTCACGCCCATAAATCCTCTTTCTCTTCAGATCGGGAAGGTTTTCATCCAGTTGGTTCATCTAGGGTTGCACCACATGCTAATGGATATACACTGAAAACCCGTTCTAATTGGGAACCTTCTGTTCCATTTCGACCATCCTTTTTTATCACTTCTATGAATGTATCATCCCCCAGAGATCTTTATGACCCTCTTCGTGATAGCATTGAGATACCAAATATTGGAGATGGGTCCCTGAAAGCTTCCCTTCTAATTCGAGGGTCATCTGTTCAGGCTTCATCACAAGTTCAGACATACGATGATTCTGCTGCAGTTGGGAAACACATGTCTGATGTTAATGATGATAAAAGTTCTGTATCTTCCCATCATAAGTTTTATGAAAATGAGCCAAACAGAAGTTCTGTTCCTCGCGGGAAAGATTGTCTTGCAACCAAAGCAGAGATAACATCAGGAACTTGTGCAAACTACCAAAATGGTGACATAGGTGTGGAACAACATGCCTTTGGTGTTGAAGATAGGATAGAAACACTGAAAAAACGGACTGAGCATGATGCTAGGCATCATAGTGATGAATCAGAGCACAAAAAAAATAGAGTAGCAAAGGATAATAAATTTCATGAAATGGAGGTTGACTTTCAGACAGATGGCAGTGTACTCAAAGAAACAAAGACGCTGAAAATTTTCCATGCAGTCCTTGTTGATCTTGTGAAAGAGTTGCTAAAACCATTTTGGCATGAAGGTCGTCTCAGCAAGGATGCACATATATTGATAGTTAAAAAATCAGTTGACAAGGTTATTAGCACTTTAGAGCCACGCCAAATTCCGACCACTGAAGATACTGCTAAGCAATATATTTCTTTATGTCGGCCAAAAATTGCAAAGTTAGTCCATGGATATGTCAATAAACATGGCAAATCTTGA 2736 0.4028 MPNSDSSVEDDPSLQEEEEDDDDDDDEEEEYEEVEVEEEEEDQEEEEMEEVEQEEEEEEEVEEEEEEEEEEVEEKEEVETVVVVEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAIESEHIKAHIVGAELEEPQRLQLPNFCSVRLQTIKVEEEEEEEEEEEEEEEEEEEEEMENEEKQEKIVVEEKDKDKYKVPNSLPNADKHSKETVEVEKEEEEEENEEAIDMEVEEEQETVVEEKDKEKDEVPDSLPDADKRSKDSSQHMELDVKEENLGSISYVLKNPEVIRPSHYMEENDAMSKASVPLHEELTLKNEDYPLKQKVSSPPKSSENLISAEDGKNQGLNVDVENSGHLQGKTSEGCSEPDCNSKASLSDVKNIDSRATKSSSDTGKDVVTGIILRDNFVEDADGGQNSKEEVMQSEMESRVDVKQKPSRTRSLSPSAEIKDGNKRPAIICAFFAKGWCIRGSSCSFLHVKDSVNNTDQGAEGNVVTAHQKRELKLEKGVKENADRSRTNEEEASPSWHPSHEKEKFPMRDSLFPENKSAFNTSNNYFSSNLSLYSSRAEEMIAIRNHHMYRGYTSTRDFSSPLGASALDSHAHKSSFSSDREGFHPVGSSRVAPHANGYTLKTRSNWEPSVPFRPSFFITSMNVSSPRDLYDPLRDSIEIPNIGDGSLKASLLIRGSSVQASSQVQTYDDSAAVGKHMSDVNDDKSSVSSHHKFYENEPNRSSVPRGKDCLATKAEITSGTCANYQNGDIGVEQHAFGVEDRIETLKKRTEHDARHHSDESEHKKNRVAKDNKFHEMEVDFQTDGSVLKETKTLKIFHAVLVDLVKELLKPFWHEGRLSKDAHILIVKKSVDKVISTLEPRQIPTTEDTAKQYISLCRPKIAKLVHGYVNKHGKS 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00464 911 Coils Coil 154 199 - -
Mepo6g00464 911 MobiDBLite consensus disorder prediction 247 281 - -
Mepo6g00464 911 MobiDBLite consensus disorder prediction 188 208 - -
Mepo6g00464 911 MobiDBLite consensus disorder prediction 416 455 - -
Mepo6g00464 911 MobiDBLite consensus disorder prediction 163 187 - -
Mepo6g00464 911 Coils Coil 212 245 - -
Mepo6g00464 911 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 108 909 - -
Mepo6g00464 911 ProSiteProfiles Zinc finger C3H1-type profile. 460 487 IPR000571 GO:0046872
Mepo6g00464 911 MobiDBLite consensus disorder prediction 1 137 - -
Mepo6g00464 911 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 465 485 IPR000571 GO:0046872
Mepo6g00464 911 MobiDBLite consensus disorder prediction 10 127 - -
Mepo6g00464 911 SUPERFAMILY CCCH zinc finger 460 484 IPR036855 GO:0046872
Mepo6g00464 911 MobiDBLite consensus disorder prediction 418 443 - -
Mepo6g00464 911 MobiDBLite consensus disorder prediction 223 246 - -
Mepo6g00464 911 MobiDBLite consensus disorder prediction 512 542 - -
Mepo6g00464 911 MobiDBLite consensus disorder prediction 712 739 - -
Mepo6g00464 911 Coils Coil 24 133 - -
Mepo6g00464 911 MobiDBLite consensus disorder prediction 322 383 - -
Mepo6g00464 911 MobiDBLite consensus disorder prediction 160 283 - -
Mepo6g00464 911 MobiDBLite consensus disorder prediction 333 383 - -
Mepo6g00464 911 MobiDBLite consensus disorder prediction 712 743 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00464 Mepo-Chr6 4750828 4757768 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mepo6g00464 zf-CCCH 1.6e-05 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00464 - - cam:101503101 964.911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g00464 6 4750828 4757768 Mepo6g00464 6 4750828 4757768 ECH