Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00461 ATGTCATTGATATCTCCGATGAGAACGGATGGTGGCAACGACGACGACACGGTGCTTTTGTGTGGTGGGGATGCAATCTCACGGTGGGACAAAAGGTTCTGCAGACACGTTATCACTCCAACGATCAACGCGAGACAGACCGAGAAAATGGGTGCATACAAATACGTTTCCGAGCTATGGCGGAAGAAGCAATCGGATGTGATGAGATTCATGCAGCGTGTGAGGTGTTGGGAGTATCGCCAACAATCCTCCATTGTTCGTCTCACCAGACCCACTCGTCCCGACAAAGCTCGCCGTTTGGGTTACAAGGCCAAGCAGGGATATGTTGTGTACCGCGTGAGGGTACGTAGAGGTGGTAGAAAGAGACCAGTTTCCAAGGGTATTGTATACGGGAAGCCCACTAACCAGGGAGTTACTCAACTCAAGTTTCAAAGGAGCAAGAGATCAGTTGCCGAGGAGCGTGCTGGGAGGAAACTTGGTGGCCTTAGGGTTCTCAATTCCTACTGGGTCAATGAGGATTCTACTTTCAAATACTTTGAGGTCATTTTGGTTGATGTTGCTCATAGTGCTATAAGAAATGACCCAAGAATCAACTGGCTCACCAATCCTGTCCACAAGCATAGGGAACTTCGTGGCCTCACTTCTGCTGGCAAAGAAAACAGAGGTTTGAGTGGTAAAGGGCATCGTTATCACAAAGCCCGTCCTTCCCGCAGGGCAAACTGGAAGAGAAACAACACCTTGTCTCTCCGTCGTTACCGTTGA 762 0.4934 MSLISPMRTDGGNDDDTVLLCGGDAISRWDKRFCRHVITPTINARQTEKMGAYKYVSELWRKKQSDVMRFMQRVRCWEYRQQSSIVRLTRPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVSKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWVNEDSTFKYFEVILVDVAHSAIRNDPRINWLTNPVHKHRELRGLTSAGKENRGLSGKGHRYHKARPSRRANWKRNNTLSLRRYR 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00461 253 ProSitePatterns Ribosomal protein L15e signature. 95 118 IPR020925 GO:0003735|GO:0005840|GO:0006412
Mepo6g00461 253 MobiDBLite consensus disorder prediction 212 253 - -
Mepo6g00461 253 SMART Ribosomal_L15e_2 51 242 IPR000439 GO:0003735|GO:0005840|GO:0006412
Mepo6g00461 253 Pfam Ribosomal L15 51 240 IPR000439 GO:0003735|GO:0005840|GO:0006412
Mepo6g00461 253 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 50 244 IPR012678 GO:0003735|GO:0005840|GO:0006412
Mepo6g00461 253 MobiDBLite consensus disorder prediction 225 239 - -
Mepo6g00461 253 Gene3D Ribosomal protein l15e 50 253 IPR024794 GO:0003735|GO:0005840
Mepo6g00461 253 FunFam Ribosomal protein L15 50 253 - -
Mepo6g00461 253 PANTHER RIBOSOMAL PROTEIN L15 50 253 IPR000439 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00461 Mepo-Chr6 4727677 4730969 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00461 50 253 Cytoplasmic Ribosomal Protein Gene Family AT4G16720 88.235 1.54e-121 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00461 K02877 - gmx:100305473 375.555