Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00451 ATGAAGTTCAACGTTGCAAATCCAACCACTGGTTGCCAGAAGAAGCTTGAAATCGATGACGATATGAAGCTTCGTGCATTTTGGGACAAGAGGATCTCACAAGAGGTTTTGGGTGATGCTTTAGGCGAAGAATTTAAGGGATATGTCTTCAAAATCACTGGTGGATGTGACAAACAAGGATTTCCAATGAAGCAGGGTGTGTTAACCCCTGGTCGTGTTCGCCTCTTGCTCCACCGAGGTACTCCTTGTTTCCGAGGACACGGAAGGCGTAATGGAGAGCGAAGAAGGAAGTCTGTTCGTGGGTGCATTGTCAGCCCAGACCTCTCTGTTCTGAACTTGGTTATTGTGAAGAAGGGTGAAAATGATTTGCCAGGTTTGACTGATGTGGAAAAGCCAAGAATGAGGGGTCCTAAGAGAGCTTCCAAAATCCGTAAGCTCTTCAATCTGTCCAAGGATGATGATGTCAGGAAGTATGTCAACACCTACCGTCGGACTTTCACAACCAAAGATGGGAAAAAGCAGAGCAAAGCCCCAAAGATACAGCGCCTGGTCACTCCTTTGACTCTTCAAAGAAAGAGGGCAAGAATTGCTGATAAGAAGAAAAGAATTGCCAAAGCAAAATCAGAGGCAGCAGATTACCAAAAACTTCTTGCCTCCAGATTGAAGGAGCAGAGGGAACGCCGCAGTGAGAGTTTGGCTAAGAAGAGATCAAGGCTCTCCACTGCTAAGCAAGGTGTTGCAGCGTAG 747 0.4645 MKFNVANPTTGCQKKLEIDDDMKLRAFWDKRISQEVLGDALGEEFKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDLPGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKDGKKQSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAADYQKLLASRLKEQRERRSESLAKKRSRLSTAKQGVAA 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00451 248 Coils Coil 189 216 - -
Mepo6g00451 248 PIRSF RPS6e 1 248 IPR014401 GO:0003735|GO:0005840|GO:0006412
Mepo6g00451 248 SMART Ribosomal_S6e_2 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
Mepo6g00451 248 ProSitePatterns Ribosomal protein S6e signature. 52 63 IPR018282 GO:0003735|GO:0005840|GO:0006412
Mepo6g00451 248 Pfam Ribosomal protein S6e 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
Mepo6g00451 248 Gene3D - 133 234 - -
Mepo6g00451 248 PANTHER 40S RIBOSOMAL PROTEIN S6 1 239 IPR001377 GO:0003735|GO:0005840|GO:0006412
Mepo6g00451 248 MobiDBLite consensus disorder prediction 220 237 - -
Mepo6g00451 248 MobiDBLite consensus disorder prediction 220 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00451 Mepo-Chr6 4645692 4648729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00451 1 242 Cytoplasmic Ribosomal Protein Gene Family AT5G10360 73.967 2.56e-119 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00451 K02991 - gmx:100804076 430.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g03259 2 42234918 42237727 Mepo6g00451 6 4645692 4648729 PCT