Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00445 ATGGAGAATAACCCTAGTTCATCCAGAGTTGACAGAAAATTCGTTGAAAGGAATAGAAGAAATCAAATGAAAGCTCTCTACCACAAGCTCAACTCACTTCTGCCTCATCAAACTTCCAAGGAGGCGATCTCAACGCCGGAACAGCTCGGGGAAGCAACAAACTACATAAAGAAATTACAGATCAACTTGGAGAAAATGAAGGAAAAGAAGAACTTTCTACTAGGAATTCAAAGGCCAAATGTGAATATGAATAGAAATGAGAACATGGGATTAAAGTCTGCAAAAATTAAGATAGAACAAATTGGCTTAGTCTTAGAGGTTGTTCTAATAACTGGATTGGATTCTCAGTTTTTGTTCAGTGAAACCCTTCGAGTTCTTCATGAAGAAGGAGTTGATATTGTTAATGCTAGTTATAAGGTCAATGAAGATTCTGTTTTCCATTCAATACACTGCCAGGTAGGAGAATTTGGCAATGAAGCTGCAAGAATATCTGAGAGATTGAAGAAGTTTATGCAAGACTATTAG 525 0.3695 MENNPSSSRVDRKFVERNRRNQMKALYHKLNSLLPHQTSKEAISTPEQLGEATNYIKKLQINLEKMKEKKNFLLGIQRPNVNMNRNENMGLKSAKIKIEQIGLVLEVVLITGLDSQFLFSETLRVLHEEGVDIVNASYKVNEDSVFHSIHCQVGEFGNEAARISERLKKFMQDY 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00445 174 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 7 59 IPR011598 GO:0046983
Mepo6g00445 174 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 5 74 IPR036638 GO:0046983
Mepo6g00445 174 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 7 170 - -
Mepo6g00445 174 Pfam Helix-loop-helix DNA-binding domain 10 60 IPR011598 GO:0046983
Mepo6g00445 174 Coils Coil 49 76 - -
Mepo6g00445 174 Gene3D - 1 94 IPR036638 GO:0046983
Mepo6g00445 174 FunFam Transcription factor bHLH162 1 85 - -
Mepo6g00445 174 SMART finulus 13 65 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00445 Mepo-Chr6 4572428 4574076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00445 3 171 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 42.778 1.96e-42 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo6g00445 HLH 5.2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00445 - - gmx:100784418 255.373