Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00444 ATGGAGGAAAATACTAGTTCATGGTTAAGGAGGGCAAAATACTCTCAGACAGTGTGTCATCGGTTGGATACATCTAGATTGAACAACATTCCATTCCGTGAACAATCGGAACAAAATTCAAGACCTTCTTCGAATGTTAAGAAAAACCTTTTAACCAACAAGCAGAGATCTTTGTCACCTTTGCCCGAAACTTTTCTTAATGATGTCTTCAGAGAAGCTAGACATGAGCAGAAGAGGTTCTCAACGCCTGGTCCTAGGAGGGACAAGAGAATTATGGGAAAGGTGTCGAACAAGGATACTCGAGAATCACCAAAGGTATCGAGTACGAAATTCCTTTCTAGTAGTCCAAATGGGCAAAAGATGGCCAAGGACATTAGCAAGGATGGTTCATGGGGTAAGTATTTTGAAAATGGCGGCGGTGGTGGTGGAAAGGTCACTGCTTTGGAAACAGCTGAGGAGTGGACTATTGACATGTCTAAGCTGTTTCTTGGCCATAAGTTCGCTCATGGTGCTCATAGTAGGCTTTATCATGGTGTATATAAGGAGGAGTCTGTAGCTGTTAAAATCATTAGGGTACCTGATGATGATGAAAACGGAGAGTTGGCTTCTAAATTAGAGAATCAGTTTGTTAGAGAAGTCACCCTTTTATCTCGCCTGCATCATCGAAATGTCATAAAGTTCATAGCTGCAAGCAGAAATCCACCGGTTTATTGTATTATCACAGAATATCTATCTGAAGGTTCCTTGAGGGCATATTTGCATAAGTTGGAGCACAAAGCTATTCCTCTACAGAAGCTAATAGCTTTTGCTCTTGATATTTCTCGTGGAATGGCATATATACACTCTCAAGGTGTCATTCATAGAGACCTTAAACCAGAGAATGTCCTCATTGATGAAGTCTTTCGCCTTAAACTTGCTGATTTTGGCATTGCTTGTGAGGAGGCAGTATGTGACTTATTGGCAGATGATCCTGGCACCTACCGTTGGATGGCGCCTGAAATGATCAAACGGAAATCATATGGGAGAAAGGTTGACGTGTACAGTTTTGGGCTTATCTTATGGGAAATGTTGACCGGAACGATTCCCTACGAGGATATGAATCCAATCCAGGCTGCTTTTGCTGTTGTGAATAAGAAATTAAGACCAGTTATTCCTTCAAACTGCCCACCTGCGATGCGAGCTTTGATCGAGCAATGTTGGTCGTTGCCACCGGATAAGAGGCCTGATTTCTGGCAAATTGTCAAGGTATTGGAGCAATTTGAATCATCCCTTGCCCGCGATGGAACCCTGACTCTGGTGCAGAACCCTCGTTGCCCAGATCAAAAGAAAGGGCTTCTCCATTGGATTCAAAAGCTTGGTCCTGTGCATCAAAATAATGGCCCTAAGCTTAAACCAAAATTCACATGA 1407 0.4271 MEENTSSWLRRAKYSQTVCHRLDTSRLNNIPFREQSEQNSRPSSNVKKNLLTNKQRSLSPLPETFLNDVFREARHEQKRFSTPGPRRDKRIMGKVSNKDTRESPKVSSTKFLSSSPNGQKMAKDISKDGSWGKYFENGGGGGGKVTALETAEEWTIDMSKLFLGHKFAHGAHSRLYHGVYKEESVAVKIIRVPDDDENGELASKLENQFVREVTLLSRLHHRNVIKFIAASRNPPVYCIITEYLSEGSLRAYLHKLEHKAIPLQKLIAFALDISRGMAYIHSQGVIHRDLKPENVLIDEVFRLKLADFGIACEEAVCDLLADDPGTYRWMAPEMIKRKSYGRKVDVYSFGLILWEMLTGTIPYEDMNPIQAAFAVVNKKLRPVIPSNCPPAMRALIEQCWSLPPDKRPDFWQIVKVLEQFESSLARDGTLTLVQNPRCPDQKKGLLHWIQKLGPVHQNNGPKLKPKFT 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00444 468 FunFam serine/threonine-protein kinase HT1 246 438 - -
Mepo6g00444 468 MobiDBLite consensus disorder prediction 106 121 - -
Mepo6g00444 468 CDD STKc_MAP3K-like 168 417 - -
Mepo6g00444 468 Gene3D Phosphorylase Kinase; domain 1 149 245 - -
Mepo6g00444 468 MobiDBLite consensus disorder prediction 75 105 - -
Mepo6g00444 468 Pfam Protein tyrosine and serine/threonine kinase 163 417 IPR001245 GO:0004672|GO:0006468
Mepo6g00444 468 SUPERFAMILY Protein kinase-like (PK-like) 149 417 IPR011009 -
Mepo6g00444 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 285 297 IPR008271 GO:0004672|GO:0006468
Mepo6g00444 468 MobiDBLite consensus disorder prediction 30 58 - -
Mepo6g00444 468 SMART serkin_6 161 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00444 468 FunFam Serine/threonine-protein kinase isoform 1 151 245 - -
Mepo6g00444 468 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 102 424 - -
Mepo6g00444 468 PRINTS Tyrosine kinase catalytic domain signature 344 366 IPR001245 GO:0004672|GO:0006468
Mepo6g00444 468 PRINTS Tyrosine kinase catalytic domain signature 241 254 IPR001245 GO:0004672|GO:0006468
Mepo6g00444 468 PRINTS Tyrosine kinase catalytic domain signature 279 297 IPR001245 GO:0004672|GO:0006468
Mepo6g00444 468 PRINTS Tyrosine kinase catalytic domain signature 325 335 IPR001245 GO:0004672|GO:0006468
Mepo6g00444 468 PRINTS Tyrosine kinase catalytic domain signature 388 410 IPR001245 GO:0004672|GO:0006468
Mepo6g00444 468 ProSiteProfiles Protein kinase domain profile. 161 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00444 468 MobiDBLite consensus disorder prediction 75 126 - -
Mepo6g00444 468 Gene3D Transferase(Phosphotransferase) domain 1 246 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00444 Mepo-Chr6 4555960 4560201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00444 1 456 MAP Kinase Kinase Kinase AT5G58950 55.577 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Mepo6g00444 PK_Tyr_Ser-Thr 3.8e-59 CL0016