LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo6g00440	ATGACCAAACACAAAAACCTTCATCTTCTTCTTCTCTCAACAATTTTCTTCCTCCTCTTCAACTCAATCTCAGCCATTGATTTCATCTTCAACGGTTTCAACTCTTCAAACGTTCTTCTCTTTGGCAATGCCACCATTGATTCTCAAATTCTAACACTCACTCATCAACAATCTTTCTCTATTGGTCGTGCTCTTTACCCTCAAAAAATTCCCACAAAAAACTCTTCTTATGTATACCCTTTTTCTACTTCTTTCATATTTTCCATGGCACCTTTTGAAGACACTCTTCCTGGCCATGGCTTAGTTTTCATCTTCACACCTGTTAAAGGCATAGAAGGTACAAGTTCAGCTCAACATCTTGGTCTTTTTAATCTCTCAAACAATGGAAATTCCAACAACCATGTTTTTGGTGTTGAATTTGATGTTTTTATGAATCAAGAGTTTGATGATATCAATGCCAACCATGTTGGAATTGACATAAACTCTCTCAATTCTGTTGTTTCACATGATGTTGGGTTTTGGCTTGATGATGAGAAAAGTGAAAAAGATCAGATTTTTGAGAAATTGGTGTTGAATAATGGTGAAAATTATCAAGTTTGGATTGATTATGAAGATTCTTTGATTAATGTTACTATAGCAAAATTGGGTATGAAAAGGCCTATTAGGCCTTTATTGAATGTTTCTCTCAATTTATCTGAAGTTTTTGAAGATGAAATGTTTGTTGGATTTACTAGCTCAACTGGGCAATTAGTTGAAAGTCACAAGATTTTAGCTTGGAGTTTTAGCGATGCAAATTTTTCATTAAGTGATGAACTTGTTACTAGTGGATTACCTTCTTTTATTCTTCCAAAAGATTCAATTTTTAAGTCCAAAGGGTTTGTTGCAGGACTTAGTGTAGGAGTTTTCTTTATTATTTGTGTTTTGGTTTTGTTGGTACTGTTTTTGATTCAAAAGAAGAGAAAAATAGACAAGAAGAGAAGTGAAATGGAAGATTGGGAGTTAGAGTATTGGCCACATAGAATGACATATGAAGAAATTGAAGCTTCCACAAAAGGTTTATCTGAGGAAAATGTGATTGGTGTTGGAGGGAATGGGAAAGTCTATAAGGGTGTTTTAAGAGGAGGAGTAGTGATTGCTGTGAAACACATTTCTCATGAGAATAATGGTATGAGAGAATTTCTTGCAGAAGTTTCAACTCTTGGGAGGTTAAAGCAAAGGAATTTAGTAGGGTTAAGAGGTTGGTGCAAGAAAAACGCTGGCAATTTCTTATTAGTCTATGAATATATGGAAAATGGAAGTTTAGACAAAAGGGTGTTTGATTGTGATGAGAGCAAGATGTTAAACTATGAAGATAGAATAAGGATTATTAAAGATGTGGCTCATGCTGTTTTGTATTTGCATGAAGGGTGGGAAGTGAAAGTGGTGCATAGGGACATTAAGGCAAGCAATGTTCTACTTGATAAGGATATGAATGGAAAGTTAGGTGATTTTGGTTTAGCTAGAATGCAAGATCATGGTCAAGTTGCTAGCACAACAAAATTGGTTGGCACGGTCGGATACATGGCTCCTGAAGTGATCAAAACTGGAAGAGCTTCGACTCATACCGATGTTTACATGTTCGGTATCTTGATTTTAGAGGTTATGTGTGGAAGGAGACCATTAGAAGAAGGTAAACCATCTTTGGTGGAGTTTGTTTGGAAACTTATGGTACAAGGGGAACTTGTGAATGCACTTGATCAAAGACTAAGGGATAAAGGTGAATTTAGTTTGCAAGAATTGGAGAGAGTGCTACATTTGGGTTTGTTGTGTGCATATCCTGAACCAAAATCTAGGCCAACAATGAGACAAGTGGTGAATATTTTAGAGGGGAAGAATGAAGGAGTCGAAGAGTCAGAGATTGAGAATATGGATAGTTATCTGCTCCAACAATTGAAATCAAGGGATATTTTGGCTGAGTATTCACAGTATTTTAGCTATGCATCACACCCAACTTTTCAAGATATTGGTGAGCACTTTTCCTCAACATCTTTCACTTGGTCTGGATCTTTAGTTCAGGGTAGGTGA	2064	0.3619	MTKHKNLHLLLLSTIFFLLFNSISAIDFIFNGFNSSNVLLFGNATIDSQILTLTHQQSFSIGRALYPQKIPTKNSSYVYPFSTSFIFSMAPFEDTLPGHGLVFIFTPVKGIEGTSSAQHLGLFNLSNNGNSNNHVFGVEFDVFMNQEFDDINANHVGIDINSLNSVVSHDVGFWLDDEKSEKDQIFEKLVLNNGENYQVWIDYEDSLINVTIAKLGMKRPIRPLLNVSLNLSEVFEDEMFVGFTSSTGQLVESHKILAWSFSDANFSLSDELVTSGLPSFILPKDSIFKSKGFVAGLSVGVFFIICVLVLLVLFLIQKKRKIDKKRSEMEDWELEYWPHRMTYEEIEASTKGLSEENVIGVGGNGKVYKGVLRGGVVIAVKHISHENNGMREFLAEVSTLGRLKQRNLVGLRGWCKKNAGNFLLVYEYMENGSLDKRVFDCDESKMLNYEDRIRIIKDVAHAVLYLHEGWEVKVVHRDIKASNVLLDKDMNGKLGDFGLARMQDHGQVASTTKLVGTVGYMAPEVIKTGRASTHTDVYMFGILILEVMCGRRPLEEGKPSLVEFVWKLMVQGELVNALDQRLRDKGEFSLQELERVLHLGLLCAYPEPKSRPTMRQVVNILEGKNEGVEESEIENMDSYLLQQLKSRDILAEYSQYFSYASHPTFQDIGEHFSSTSFTWSGSLVQGR	687

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo6g00440	687	Gene3D	Phosphorylase Kinase; domain 1	315	428	-	-
	Mepo6g00440	687	Gene3D	-	24	266	-	-
	Mepo6g00440	687	SUPERFAMILY	Concanavalin A-like lectins/glucanases	24	265	IPR013320	-
	Mepo6g00440	687	FunFam	Putative L-type lectin-domain containing receptor kinase VII.2	315	428	-	-
	Mepo6g00440	687	PANTHER	-	42	625	-	-
	Mepo6g00440	687	Pfam	Legume lectin domain	26	264	IPR001220	GO:0030246
	Mepo6g00440	687	CDD	STKc_IRAK	359	623	-	-
	Mepo6g00440	687	ProSiteProfiles	Protein kinase domain profile.	353	628	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo6g00440	687	ProSitePatterns	Protein kinases ATP-binding region signature.	359	381	IPR017441	GO:0005524
	Mepo6g00440	687	FunFam	L-type lectin-domain containing receptor kinase S.4	24	269	-	-
	Mepo6g00440	687	SMART	serkin_6	353	620	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo6g00440	687	Gene3D	Transferase(Phosphotransferase) domain 1	429	646	-	-
	Mepo6g00440	687	CDD	lectin_legume_LecRK_Arcelin_ConA	26	262	IPR001220	GO:0030246
	Mepo6g00440	687	FunFam	L-type lectin-domain containing receptor kinase S.4	429	634	-	-
	Mepo6g00440	687	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	474	486	IPR008271	GO:0004672\|GO:0006468
	Mepo6g00440	687	Coils	Coil	315	335	-	-
	Mepo6g00440	687	SUPERFAMILY	Protein kinase-like (PK-like)	327	622	IPR011009	-
	Mepo6g00440	687	Pfam	Protein kinase domain	355	619	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo6g00440	Mepo-Chr6	4489565	4492022	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo6g00440	21	569	Receptor kinase-like Gene Family	AT4G04960	65.108	0.0	713

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Mepo6g00440		Pkinase	5.9e-45	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo6g00440	-		-	gmx:100804391	1093.18