Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00437 ATGGAAGATTGGGAGTTAGAGTATTGGCCACACAGAATGACATATGAAGAAATTGAAGCTTCCACAAAAGGTTTCTCTGAGGAAAATGTGATTGGTGTTGGAGGGAATGGGAAAGTCTATAAGGGTGTTTTAAGAGGAGTAGTGATTGCTGTGAAACACATTTCTCATGAGAATAATGGTATGAGAGAATTTCTTGCAGAAGTTTCAACTCTTGGGAGGTTAAAGCAAAGGAATTTAGTAGGGTTAAGAGGTTGGTGCAAGAAAAATGCTGGCAATTTCTTATTAGTTTATGAATATATGGAAAATGGAAGTTTAGACAAAAGGGTGTTTGATTGTGATGAGAGCAAGATGTTAAACTATGAAGATAGAATAAGGATTATTAAAGATGTGGCTCATGCTGTTTTGTATTTGCATGAAGGGTGGGAAGTGAAAGTGGTGCATAGGGACATCAAGGCAAGCAATGTTTTACTTGATAAGGATATGAATGGCAAGTTAGGTGATTTTGGTTTAGCTAGAATGCAAGATCATGGCCAAGTTGCTAGCACAACAAAATTGGTTGGCACGATTGGTTACATGGCTCCCGAAGTGATCAAAACTGGAAGAGCTTCAACTAATACCGATGTTTACATGTTCCGTATCTTGATTTTAGAGGTTATGTGTGGAAGGAGACCATTAGAAGAAGGTAAACCATCTTTGGTGGAGTTTGTTTGGAAACTTATGGTACAAGGGGAACTTGTGAATGCACTTGATCAAAGACTAAGGGATAAAGGTGAATATAGTGTGCAAGAATTGGAGAGAGTTCTTCATTTGGGTTTGTTGTGTGCTTATCCTGAACCAAAATCTAGGCCAACAATGAGACAAGTGGTGAATATTTTAGAGGGGAAGAATGAAGGAGTTGAAGAGTTAGAGATTGAAAATATGGATAGTTATTTGCTCCAACAATTGAAATCAAGGGATATATTGGCTGAGTATTCTCAGTATTTTAGCTATGCATCACATCCAACTTTTCAAGATATTGGTGGTCACTTTTCCTCAACATCTTTCACTTGGTCTGGATCTTTAGTTCAGGGTAGGTGGTATTATTGCTTAAGGTGGTTTCTAGTTAATTACTATTAG 1116 0.3754 MEDWELEYWPHRMTYEEIEASTKGFSEENVIGVGGNGKVYKGVLRGVVIAVKHISHENNGMREFLAEVSTLGRLKQRNLVGLRGWCKKNAGNFLLVYEYMENGSLDKRVFDCDESKMLNYEDRIRIIKDVAHAVLYLHEGWEVKVVHRDIKASNVLLDKDMNGKLGDFGLARMQDHGQVASTTKLVGTIGYMAPEVIKTGRASTNTDVYMFRILILEVMCGRRPLEEGKPSLVEFVWKLMVQGELVNALDQRLRDKGEYSVQELERVLHLGLLCAYPEPKSRPTMRQVVNILEGKNEGVEELEIENMDSYLLQQLKSRDILAEYSQYFSYASHPTFQDIGGHFSSTSFTWSGSLVQGRWYYCLRWFLVNYY 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00437 371 Gene3D Transferase(Phosphotransferase) domain 1 100 315 - -
Mepo6g00437 371 SUPERFAMILY Protein kinase-like (PK-like) 5 293 IPR011009 -
Mepo6g00437 371 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 1 99 - -
Mepo6g00437 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Mepo6g00437 371 PANTHER - 6 296 - -
Mepo6g00437 371 SMART serkin_6 25 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00437 371 Gene3D Phosphorylase Kinase; domain 1 4 99 - -
Mepo6g00437 371 ProSitePatterns Protein kinases ATP-binding region signature. 31 52 IPR017441 GO:0005524
Mepo6g00437 371 FunFam L-type lectin-domain containing receptor kinase S.4 100 305 - -
Mepo6g00437 371 Pfam Protein kinase domain 26 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00437 371 ProSiteProfiles Protein kinase domain profile. 25 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00437 Mepo-Chr6 4465739 4467045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00437 1 240 Receptor kinase-like Gene Family AT4G04960 68.033 6.39e-116 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mepo6g00437 Pkinase 6.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00437 - - gmx:100804391 603.208