Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00414 ATGGGTTTGAGTTCTAAGCAAGTTTCTAGTAGAGGTGTTGATTGGAACCAAACCTTGTTGCAAGATCAAAACTTGGAACTTCCAAAGACTCTTCCTATGAGAAAACAACAGCAACAAAATCAGCAACTAGAGGCAGTGAATTGTCCAAGATGTGATTCTACAAATACCAAATTTTGTTACTACAACAACTATAACAAGTCTCAACCTCGCCATTTCTGCAGGGCTTGTAAGAGACATTGGACTAAAGGTGGTACTCTAAGGAATGTTCCTGTTGGTGGTGTTAGGAAGAATAAGAGAGTCAAGATATCAACCTCTATTAGCACCTCCACCACCACCTCAAATGTCAACAGGCAGAATAAAAAAACCACACCTTCTTCTATGCATGAATCTCTTATTCATCCACCATCTTTTTTGCCACCACAGAATCTAATGGGTACCAAAGATCAATCAGAAAGTAACAATGAAGATTTTGGTATTGGTAATGGTATGTTTCTGAGTTCATCTATGCCTTTTCCTCAAAACCAAAGCTTTCTATTCCCATTCTCAAACTCAAGCTCTTTAAGGTCATCTAATGGATATAACTATGGTGAAGAGTTTAAAATAATGGAGGAGTCAACTATTAACAACGGTGCAATGCCAAGTACTAGCTGTAGTGGCACTATTACACATCCATGGGAGATACCTGCAACAAGTAGTGGCATGGATATGTCAAACTATTGGAGTTGGGAGGATATTGATTCTTTGGTCTCAACTGATCTAAATGTTCCTTGGGATGATTCTGATATTAAACCTTGA 795 0.3836 MGLSSKQVSSRGVDWNQTLLQDQNLELPKTLPMRKQQQQNQQLEAVNCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGVRKNKRVKISTSISTSTTTSNVNRQNKKTTPSSMHESLIHPPSFLPPQNLMGTKDQSESNNEDFGIGNGMFLSSSMPFPQNQSFLFPFSNSSSLRSSNGYNYGEEFKIMEESTINNGAMPSTSCSGTITHPWEIPATSSGMDMSNYWSWEDIDSLVSTDLNVPWDDSDIKP 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00414 264 ProSiteProfiles Zinc finger Dof-type profile. 46 100 IPR003851 GO:0003677|GO:0006355
Mepo6g00414 264 ProSitePatterns Zinc finger Dof-type signature. 48 84 IPR003851 GO:0003677|GO:0006355
Mepo6g00414 264 MobiDBLite consensus disorder prediction 103 139 - -
Mepo6g00414 264 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 35 190 IPR045174 GO:0003700|GO:0006355
Mepo6g00414 264 MobiDBLite consensus disorder prediction 103 130 - -
Mepo6g00414 264 Pfam Dof domain, zinc finger 45 98 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00414 Mepo-Chr6 4264282 4265765 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00414 42 119 C2C2-Dof Transcription Factor Family AT5G66940 62.821 5.51e-30 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mepo6g00414 zf-Dof 2.4e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00414 - - gmx:778119 345.125