Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00388 ATGGATCATAACATGACAAGTTTCTACACATTAGTTTTGACAGTATTCTTTTTATGTATGAATACTACTGTTTCTTCTAGAGATAAGAAATTGGTTGGTGGAAGAAATTTGAGCATTGATGATAAGGGTGATCTTGTGACTAACTTACCAGGTCAGCCTCAAGCAGATTTCAAGCACTATGCTGGGTATGTCACCGTCAATGAAACCAATGGAAGATTTCTCTTTTATTGGTTTTTTGAGGCCGTGATCAAACCTGAGGAGAAACCATTGCTTTTGTGGCTTAATGGAGGTCCTGGATGCTCTTCTGTGGGATATGGAGCAACACAAGAGATTGGCCCATTTTTAGTGGACACCGATGGCAAAGGACTTAAATTTAATAACTTCTCATGGAATAGAGAAGCCAACCTGTTATTCCTTGAATCTCCTGTTGGTGTTGGATTTTCCTACTCAAATACAACCAGTGAATACAAACAATTGGGAGATGATTTCACAGGACATTTTGTACCACAATTGGCTGAAGTTATCCTTGATAGGAATAAAGATCATTCCCTACATATTGATCTCAAGGGAATTTTGGTGGGAAACCCTGAAACTTCTTATGTTGAGGATTGGTGGGGTATGATTGATTATGCTTGGAGCCATGCAGTGATATCTGATGAAACTCACAAATTAATTCGAACAAATTGTGAATTTAATAGCAGTGAAGATATATTGAGTAAGGATGATGTATGTCAAAAAGGACTAGATGAAATGTTCAAGCAGTATAATGAAATTGATATCTACAGTCTCTACACCCCTACTTGCTTAGCCAATAAGGGGCTTTCAAAACCAATGCAAAAGGTTATGAAGCGCTCATCAAATAAAGACATGATACCAAGGGTAATGGGTGGTTATGATCCATGTCTAGATGACTATGCTAAAATATTTTATAACAGACCAGATGTTCAGAAGGCCCTCCATGCCAGTGATGGTCACAATCTCAAGAATTGGAGTATTTGCAATGATGACATATTTCACGGCTGGGCACAATCAAAGCGTTCTATTATCCCAATTTACAAGAAGCTTATTCCAACAGGACTTAGAATTTGGCTTTACAGTGGAGACACAGATGGCAGAGTGCCTGTATTGTCAACAAGATACAGCATAAATCTTCTTGGTTTGCCAATCACCAAGCCATGGAGTCCATGGTACAATGAAAAGCAGGTTAGTGGGTGGTATCAAGAATACAAAGGGCTTACATTTGCTACATTTCGAGGAGTTGGCCATGATGTGCCTACTTTTAAACCAAGCAATTCACTTGTGTTCTTTTCCTCATTTCTTGTGGGACAATCACTACCTTCTACAAGATGA 1350 0.3867 MDHNMTSFYTLVLTVFFLCMNTTVSSRDKKLVGGRNLSIDDKGDLVTNLPGQPQADFKHYAGYVTVNETNGRFLFYWFFEAVIKPEEKPLLLWLNGGPGCSSVGYGATQEIGPFLVDTDGKGLKFNNFSWNREANLLFLESPVGVGFSYSNTTSEYKQLGDDFTGHFVPQLAEVILDRNKDHSLHIDLKGILVGNPETSYVEDWWGMIDYAWSHAVISDETHKLIRTNCEFNSSEDILSKDDVCQKGLDEMFKQYNEIDIYSLYTPTCLANKGLSKPMQKVMKRSSNKDMIPRVMGGYDPCLDDYAKIFYNRPDVQKALHASDGHNLKNWSICNDDIFHGWAQSKRSIIPIYKKLIPTGLRIWLYSGDTDGRVPVLSTRYSINLLGLPITKPWSPWYNEKQVSGWYQEYKGLTFATFRGVGHDVPTFKPSNSLVFFSSFLVGQSLPSTR 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00388 449 Pfam Serine carboxypeptidase 50 157 IPR001563 GO:0004185|GO:0006508
Mepo6g00388 449 Pfam Serine carboxypeptidase 160 441 IPR001563 GO:0004185|GO:0006508
Mepo6g00388 449 Gene3D alpha/beta hydrolase 162 276 IPR029058 -
Mepo6g00388 449 Gene3D alpha/beta hydrolase 41 161 IPR029058 -
Mepo6g00388 449 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 138 IPR001563 GO:0004185|GO:0006508
Mepo6g00388 449 PRINTS Carboxypeptidase C serine protease (S10) family signature 139 149 IPR001563 GO:0004185|GO:0006508
Mepo6g00388 449 PRINTS Carboxypeptidase C serine protease (S10) family signature 412 425 IPR001563 GO:0004185|GO:0006508
Mepo6g00388 449 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 45 429 IPR001563 GO:0004185|GO:0006508
Mepo6g00388 449 FunFam Carboxypeptidase 298 445 - -
Mepo6g00388 449 Gene3D - 301 337 - -
Mepo6g00388 449 Gene3D - 348 442 - -
Mepo6g00388 449 FunFam Carboxypeptidase 348 442 - -
Mepo6g00388 449 SUPERFAMILY alpha/beta-Hydrolases 42 446 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00388 Mepo-Chr6 3983264 3987439 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00388 306 445 Calmodulin-binding Proteins AT2G22960 34.043 1.01e-15 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00388 K16297 - gmx:100819700 673.7