Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00387 ATGTGCATTTTTGTTACAGGTCCTGGATGCTCTTCTGTGGGATATGGAGCAACACAAGAGATTGGCCCATTTTTAGTGGACACCGATGGCAAAGGACTTAAATTTAATAACTTCTCATGGAATAGAGAAGCCAACTTGTTATTCCTTGAATCTCCTGTTGGAGTTGGATTTTCCTACTCAAATACAACCAGCGAATACAAACAATTGGGAGATGATTTCACAGCTAATGATACTTACACTTTCCTACATAAATGGTTCCTCAAGTTTCCTTCATATAGAACAAGGGCATTGCACATAGGAGGAGAGAGCTATGGAGGACATTTTGTACCACAATTGGCTGAAGTTATCCTTGATAGGAATAAAGATCCTTCCCTACATATTGATCTCAAGGGAATTTTGGTGGGAAACCCTGAAACTTCTTATGCTGAGGATTATTGGGGTATGATTGATTATGCTTGGAGCCATGCAGTGATATCTGATGAAACTCACAAATTACTTAGAAAAAACTGTGAATTTAATAGCAGTGAAGATATATTGAGTAAGGATGATGTATGTCAAAAAGGACTAGATGAAATGTTCAAGCAGTACAATGAAATTGATATCTACAGTCTTTACACCCCTACTTGCTTAGCCAATAAGGGGCTTTCAAAACCAATGCAAAAGGTTATGAAGCGTTCATCAAACAAAGACATGCGTTCTATTATCCCAATTTACAAGAAGCTTATTCCAACAGGACTTAGAATTTGGCTTTACAGTGGAGACACAGATGGCAGAGTGCCTGTATTGTCAACAAGATACAGCATAAATCTTCTTGGTTTGCCAATCACCAAGCCATGGAGTCCATGGTACAATGAAAAGCAGGTTAGCGGGTGGTATCAAGAATACAAAGGGCTTACATTTGCTACATTTCGAGGAGCTGGCCATGATGTGCCTACTTTTAAACCAAGCAATTCACTTGTGTTCTTTTCCTCATTTCTTGTGGGACAATCACTACCTTCTACAAGATGA 1008 0.3889 MCIFVTGPGCSSVGYGATQEIGPFLVDTDGKGLKFNNFSWNREANLLFLESPVGVGFSYSNTTSEYKQLGDDFTANDTYTFLHKWFLKFPSYRTRALHIGGESYGGHFVPQLAEVILDRNKDPSLHIDLKGILVGNPETSYAEDYWGMIDYAWSHAVISDETHKLLRKNCEFNSSEDILSKDDVCQKGLDEMFKQYNEIDIYSLYTPTCLANKGLSKPMQKVMKRSSNKDMRSIIPIYKKLIPTGLRIWLYSGDTDGRVPVLSTRYSINLLGLPITKPWSPWYNEKQVSGWYQEYKGLTFATFRGAGHDVPTFKPSNSLVFFSSFLVGQSLPSTR 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00387 335 FunFam Carboxypeptidase 234 328 - -
Mepo6g00387 335 Gene3D alpha/beta hydrolase 1 211 IPR029058 -
Mepo6g00387 335 Gene3D - 234 328 - -
Mepo6g00387 335 FunFam Carboxypeptidase 46 211 - -
Mepo6g00387 335 Pfam Serine carboxypeptidase 221 327 IPR001563 GO:0004185|GO:0006508
Mepo6g00387 335 Pfam Serine carboxypeptidase 7 213 IPR001563 GO:0004185|GO:0006508
Mepo6g00387 335 PRINTS Carboxypeptidase C serine protease (S10) family signature 49 59 IPR001563 GO:0004185|GO:0006508
Mepo6g00387 335 PRINTS Carboxypeptidase C serine protease (S10) family signature 298 311 IPR001563 GO:0004185|GO:0006508
Mepo6g00387 335 PRINTS Carboxypeptidase C serine protease (S10) family signature 85 110 IPR001563 GO:0004185|GO:0006508
Mepo6g00387 335 PRINTS Carboxypeptidase C serine protease (S10) family signature 36 48 IPR001563 GO:0004185|GO:0006508
Mepo6g00387 335 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 6 315 IPR001563 GO:0004185|GO:0006508
Mepo6g00387 335 SUPERFAMILY alpha/beta-Hydrolases 7 331 IPR029058 -
Mepo6g00387 335 ProSitePatterns Serine carboxypeptidases, serine active site. 99 106 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00387 Mepo-Chr6 3978153 3981625 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00387 228 331 Calmodulin-binding Proteins AT2G22960 36.190 2.25e-14 68.9