Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00386 ATGACAAGTTTCTACACATTGGCTTTGATAGTGTTGTTTTTACATGTGAATCCTATTGTTTCTTCTAAAGATAGGAAATGGGGTGGTGGGAGAAAATTAAGCTATGGTGATAATGATGATCTTGTGACTAACTTACCTGGCCAGCCTCCTGTTGATTTCCAGCACTATGCTGGATATGTCACAGTTAATGAAACCAATGGAAGAGCATTGTTTTACTGGTTTTTTGAGGCCATGACCAAGCCTGAAGACAAACCATTGGTTTTATGGCTTAATGGAGGTCCTGGATGCTCTTCTGTGGGATATGGAGCAACACAAGAGATTGGTCCTTTTTTAGTAGACACTGATGGCAAGGGTCTCAAATTTAATAACTTCTCATGGAACAAAGAAGCAAACATGTTATTCTTGGAATCTCCTGTTGGAGTTGGATTTTCTTACTCAAATACAACCAGTGAATATGCACAACTAGGAGATGACTTCACAGCTAATGATGCCTACACTTTTCTGCACAATTGGTTTCTCAAGTATCCATCATATAGAACAAGAGCATTTTACATAGCAGGAGAGAGCTATGCAGGAAAGTATGTACCAGAGCTTGCTGAACTCATCATTGATAGAAACAATAACCCTTCTCTTCACATTGATCTCAAGGGCATTTTGCTGGGAAACCCTGAAACTTCTTATGCTGAAGATTGGTTAGGAATGGTTGATTATGCTTGGAGTCATGCAGTGATATCTGATGAAACCTATAAAACAATCCGAAGAACCTGTGACTTTAACAGTAGTGATCCATGGAAAAATGAAGAATGTACTCATGGTGTGGATGAAGTGCTTAAACAGTACAATGAAATTGATATCTACAGCCTGTATACCTCTGTCTGCTTTGCTAGTACAGCACGATCGAACGATCAATCCATGAAAATGGTGATGAAGCACTCATCTTTAATGATACCAAGGATCATGGGTGGTTATGATCCATGTTTGGATGACTATGCTAAAGCTTTTTACAACAAACCAGATGTTCAGAAAGCCCTTCATGCTAGTGATGGTCATAATCTAAGGAATTGGAGTATTTGCAACAACGACATATTTACTGGATGGAAACAAACAAAACACACTGTTATCCCAATTTACAAGAAGCTTATTTCAGCTGGACTTAGGATTTGGCTTTACAGTGGAGACACCGACGGTAGAGTGCCAGTTCTATCAACCAGATACAGCCTAAGCATTCTTGATTTGCCTATCACTAAGCAATGGAGTCCTTGGTACCATGAAAAGGAGGTAAGTGGATGGTATCAAGAATATGAAGGACTTACATTTGCTACATTTAGAGGAGCTGGTCATGCAGTGCCCTGCTTTAAACCAAGCAATTCACTTAAATTCTTCACCACCTTTCTTCTTGGAGAATCACCACCTTCAACTAGATAA 1425 0.3937 MTSFYTLALIVLFLHVNPIVSSKDRKWGGGRKLSYGDNDDLVTNLPGQPPVDFQHYAGYVTVNETNGRALFYWFFEAMTKPEDKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGKGLKFNNFSWNKEANMLFLESPVGVGFSYSNTTSEYAQLGDDFTANDAYTFLHNWFLKYPSYRTRAFYIAGESYAGKYVPELAELIIDRNNNPSLHIDLKGILLGNPETSYAEDWLGMVDYAWSHAVISDETYKTIRRTCDFNSSDPWKNEECTHGVDEVLKQYNEIDIYSLYTSVCFASTARSNDQSMKMVMKHSSLMIPRIMGGYDPCLDDYAKAFYNKPDVQKALHASDGHNLRNWSICNNDIFTGWKQTKHTVIPIYKKLISAGLRIWLYSGDTDGRVPVLSTRYSLSILDLPITKQWSPWYHEKEVSGWYQEYEGLTFATFRGAGHAVPCFKPSNSLKFFTTFLLGESPPSTR 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00386 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 171 196 IPR001563 GO:0004185|GO:0006508
Mepo6g00386 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 135 145 IPR001563 GO:0004185|GO:0006508
Mepo6g00386 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 122 134 IPR001563 GO:0004185|GO:0006508
Mepo6g00386 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 437 450 IPR001563 GO:0004185|GO:0006508
Mepo6g00386 474 ProSitePatterns Serine carboxypeptidases, serine active site. 185 192 IPR018202 GO:0004185
Mepo6g00386 474 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 42 454 IPR001563 GO:0004185|GO:0006508
Mepo6g00386 474 Gene3D - 326 364 - -
Mepo6g00386 474 SUPERFAMILY alpha/beta-Hydrolases 38 468 IPR029058 -
Mepo6g00386 474 Gene3D - 373 467 - -
Mepo6g00386 474 FunFam Carboxypeptidase 373 467 - -
Mepo6g00386 474 Gene3D alpha/beta hydrolase 36 295 IPR029058 -
Mepo6g00386 474 FunFam Carboxypeptidase 36 295 - -
Mepo6g00386 474 Pfam Serine carboxypeptidase 46 465 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00386 Mepo-Chr6 3949433 3953035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00386 331 468 Calmodulin-binding Proteins AT2G22960 30.935 1.65e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00386 K16297 - gmx:100819700 862.062