Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00380 ATGGGAGTTTATGTGAACCAATTCGCAAAAGTAGCACGAACCGGTAGGAATGAATATCAATACAAGTTTATAGGGGATATAGTCAAAAACGTATCCAACAAGATAAATCGTGCTCCTTTACATGTTGTCGATTACCCAGTTGGCATGCAGTTTCGAGTCCTTAAAGTAAATTCACTTCTAGAAGTTGCATCTAATTATGAAGTCAAGATGATAGGTATCTGTGGACTTGGAGGAATGGGTAAGACAACTCTTGCAAGAGCAGTTTATAATTTCATTGCTGATCAATTTGAATGTGTATGTTTTCTTCATAATGTGAGAGAAAATTCAGCAAAACATGGTCTAGAGCATCTCCAAAAGGATTTTCTTTCCAAAACTGTTGGATTGGACATTAAGTTAGGAGATAGTAGTGAGGGAATTCCAATCATAAAGCAAAGGCTACACCGGAAAAAGGTTCTATTGGTTCTTGATGACGTTAATGAATTGAAGCAGGTGCAAGTCTTAGCTGGAGGGCTTGATTGGTTTAGTGTTGGTAGTAGGGTGATCATTACCACTCGAGACAAACACTTGTTATCAAGTCATGGGATTGAACTAACATATGAAATAGATGAGTTGAATAAGGAAGAAGCACTTGAATTGCTTAGGTGGAAGGCTTTTAAAAGTAAGCAAGTTACTTCAAGTTATGAGCACGTTTTAAACCGCGCAGTAAATTATGCTTCTGGCCTTCCATTGGCATTAGAAGTATTAGGTTCCAACTTGTTTGGAAAGAATATAAAAGAGTGGAATTCTTTGTTGGATCGATATGAAAGGATTCCTAATAAAGAGATTCAGAAGATACTTAAAGTGAGTTTCGATGCTTTGGAGGAAGACGAGCAAAGTGTTTTTCTCGACATTGCTTGTTGCTTTAAAGGGTATAACCTAAAACAGATGGAAGATATGCTTTCTGATCATTACGGTCAATGCATGAAATATCATATTGGAGTTTTGGTTAAAATAACTCTATTAAGGATTTGTCCGTGGAATTACAGTGTCACAATGCATGACTTGATAGAAGACATGGGTAAAGAAATTGTAAGACAAGAATCAGTAAGAGAGCCTGGAAAACGTAGCAGGTTGTGGTTCCATGAAGATATATTTCAGGTCATTGAAGAAAATTCAGGAACAAGTCAAATTGAAATCATACATTTGGATTTTCCACTACCTCAAGCAATTGTAGAGTGGAAAGGAGATGAATTCAAGAAGATGAAAAACCTCAAAACACTTATTGTTAAAACTAGTACCTTTTCCAAACCTCTTGTACATCTTCCTAATAGTTTAAAAATGTTCTTGGGTATGAAAGTTTTACATTTAGACAAGTGTTACAGGTACATCTCCATTTTAGAGTATCCAGGCTTTATAGGAAGGAACACAATCCTTTTTGAAGAGCACATTTTCAGAGGGGAAGCAGCACAATCCTGTTTGATTACATACAATGATACAAAAGCTCATGACCATGAAGCTTAA 1500 0.362 MGVYVNQFAKVARTGRNEYQYKFIGDIVKNVSNKINRAPLHVVDYPVGMQFRVLKVNSLLEVASNYEVKMIGICGLGGMGKTTLARAVYNFIADQFECVCFLHNVRENSAKHGLEHLQKDFLSKTVGLDIKLGDSSEGIPIIKQRLHRKKVLLVLDDVNELKQVQVLAGGLDWFSVGSRVIITTRDKHLLSSHGIELTYEIDELNKEEALELLRWKAFKSKQVTSSYEHVLNRAVNYASGLPLALEVLGSNLFGKNIKEWNSLLDRYERIPNKEIQKILKVSFDALEEDEQSVFLDIACCFKGYNLKQMEDMLSDHYGQCMKYHIGVLVKITLLRICPWNYSVTMHDLIEDMGKEIVRQESVREPGKRSRLWFHEDIFQVIEENSGTSQIEIIHLDFPLPQAIVEWKGDEFKKMKNLKTLIVKTSTFSKPLVHLPNSLKMFLGMKVLHLDKCYRYISILEYPGFIGRNTILFEEHIFRGEAAQSCLITYNDTKAHDHEA 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00380 499 Gene3D - 29 196 IPR027417 -
Mepo6g00380 499 Pfam NB-ARC domain 59 285 IPR002182 GO:0043531
Mepo6g00380 499 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 297 IPR027417 -
Mepo6g00380 499 PRINTS Disease resistance protein signature 145 159 - -
Mepo6g00380 499 PRINTS Disease resistance protein signature 70 85 - -
Mepo6g00380 499 PRINTS Disease resistance protein signature 238 252 - -
Mepo6g00380 499 PRINTS Disease resistance protein signature 412 428 - -
Mepo6g00380 499 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 441 IPR044974 GO:0006952
Mepo6g00380 499 SMART AAA_5 67 207 IPR003593 GO:0016887
Mepo6g00380 499 SUPERFAMILY "Winged helix" DNA-binding domain 273 381 IPR036390 -
Mepo6g00380 499 Gene3D - 203 287 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00380 Mepo-Chr6 3894529 3900097 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00380 47 441 WRKY Transcription Factor Family AT4G12020 32.108 2.25e-45 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00380 - - tpra:123910163 650.203