Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00378 ATGGCCTTCAACTGCAATCCTCCTACATTTGAGCAAGTGAGGGTCACAATCCAGTGGCTACTTGGTGTTACAATTGCTGGCTGGTTGATCTCCTTAGCAGTCATCACCTATGGACCCTCTGATCTCAACTTCCATGTAACTGAAGCTTCCCTCACAAAGTTCAACCTCACAGGAAACAATACCTTATCTTACAAGTTAGAAGCCAAGATTGCATCAAGAAACCCCAACAAGAAAGTCATTGTGCATTATCGGGTCATCACTGCAAATGCAAGGTACAAACGGACTAAGTTTGCTAGCTTGAATTTGACATCTTTTGATCAAGGGCACAAGAATACCACTTTTATTAATCTAAAGTTTGAAGGGAAGAGTGTGATCAAACTCAAACCTAAACAACTTGGTGAGTATAATGAAGAGACACGTTTAGGGATCTATCATCACTTGGCTATTGATTTGGATTTTACGATCAAATATAAGTTTGGATTTCACAAGACTGGTCGCTTCAAACCACCAATCGTGCATTGCAGTCCTTTGAGTCTTTCTTTGATCACTTCTAATGGTAACTCATCATCATCACCACCTTCTTTTCATGTCACTAAATGTGATGCTGGTTTTTTCTTTAGAAACCGTGGACGTTAA 636 0.3994 MAFNCNPPTFEQVRVTIQWLLGVTIAGWLISLAVITYGPSDLNFHVTEASLTKFNLTGNNTLSYKLEAKIASRNPNKKVIVHYRVITANARYKRTKFASLNLTSFDQGHKNTTFINLKFEGKSVIKLKPKQLGEYNEETRLGIYHHLAIDLDFTIKYKFGFHKTGRFKPPIVHCSPLSLSLITSNGNSSSSPPSFHVTKCDAGFFFRNRGR 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00378 211 Pfam Late embryogenesis abundant protein 69 159 IPR004864 -
Mepo6g00378 211 PANTHER OS05G0367900 PROTEIN 18 180 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00378 Mepo-Chr6 3861004 3861639 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00378 41 186 SNARE and Associated Proteins AT1G32270 28.667 4.05e-15 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00378 - - psat:127128902 225.328