Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00377 ATGGGGTTTTTGAATTTGGGGTTGCATGTGCAAATCTTCGTCACTTCCATGATCCTGATTCTAATGGCGGCTTTTTGTGTTGCAGACACTGACCCTGTTGATGTTGCAGCTATCAATAGTCTATATGTTGCTATGAACTCACCACCTCTTCAAGGGTGGAAGCCTGTGGGAGGGGATCCATGTTTAGAACTCTGGCAAGGTGTGGATTGTGTCTTCACCAACATAACTGCAATACGACTAGGAGGCTTGAATTTGGGTGGAGAGCTTGGCAGTAATTTGGATTTTCCATCGATTATAGACATTGATCTTAGCAACAACCACATTGGAGGTGCCATTCCATTCACTTTACCCCCTACGCTGAGGACCTTGTCTCTGTCAGGAAATAAGTTAAACGGAAGTATCCCAGATGCCTTATCCCTATTGACTCAATTGTCAAATTTGGATTTGGCCAATAACAACCTGACCGGTCAGCTACCTTCCTCAATGGGGAGTTTGTCATCTCTTACAACATTACTGTTGCAGAACAATCAACTTGTAGGGACCCTTTTTGTTTTGCAAGGCCTTCCTCTTCAGGATTTGAATATAGAGAATAATTTGTTCTCCGGGCCGATTCCTCCAAATTTGTTGAGCATCCCTAATTTCAGTAAAAATGGGAATCCGTTCAATACTACTATTATTCCATCTCCGCCTGTTGCTGCAGCCCCTTCACCTGTAGCTATCGGTCGATCCCCTGAAGAATCACCTTGGCATGTGGCATATAGTCCTGCTGACTTCACAGCATCGATGCCTGGAAATGTTAAGAAGTCTTTCCTAGCCAATCATGTCATTTGGATTGCCGGTGCCGGTTTATTGATTTTTATCGCTTTGGGAATTTGTCTTTTAATGGTGTGGTGCTGTAAGAGAAAGCCAAAAAATAAAAATCCTCAGAAGCTTGATGTGGAGGCTTTTCCAAAAACTTTGCATAAACCTACTCGCAATGACCCTGTTTTCGAAACTACTAATCAAGATGGAAAAGCTGAGAAAATATATCGTTTAAATGAAGTGCCAAATAGAAGAACAAGTTCGATTCCAAAGGTTCCGGATCAACAAGAAGTATATGTTAACAAAGTATCTGCGACTTCAGAATACAATAATGTTTCCAAACCTTCACTCCTGCAACCACCGCCACATTCTCTGCCGAGCATTCCTGGTGAGAAGGTCATCGTCAATCCAGCTTCAACTACCAAATCAACTGAAAGGCAAGTTATGACAAGTTCGGTCAAAATATACACTGTCGCGTCACTTCAGCAATATACAAATAGCTTTTCCCAAGAAAATCGTATCGGGGAAGGCACTCTTGGATCTGTTTATAGGGCTGAGCTCCCTGATGGAAAGATGTTGGCAGTGAAGAAGCTGGATGCTACGGCATTCAAGGACCAGAATGACGAACAGTTTCTTCAATTGGTATCCAGCATCTCGAAAATTAAGCACGCCAATATTGCAAAACTTGTCGGCTACTGTGCTGAGTATAACCAACGATTACTTATATTTGAGTATTGTAATAATGGAACACTACATGATGCACTTCAAGGAGACGACGAACATTGTATTAAATTTCCATGGAATGCACGCATTAAGGTTGCACTTGGAGCTGCAAGGGCTTTAGAGTATCTGCATGAGAATTTTCAGCCGCCTATTGTGCATCGAAATTTTAGATCCGCTAATGTTCTCCTGAATGAAAAGTACGAAGTACGTGTCTCTGATTGTGGATTAGGTCATTTGCTATCTTCTGGCACTGCTGGTCAGTTATCTGGACGCCTCCTCACAGCTTACGGTTACAGTGCTCCAGAATTTGAGTCGGGAAGCTATACACAGCAAAGTGATGTCTTCAGTTTTGGAGTTGTAATGCTAGAACTCCTCACAGGAAGAAAATCCTATGACAGGTCACGGCCTCGTGCAGAGCAGTTTTTGGTCAGATGGGCAATACCTCAACTCCATGACATTGATGCCTTGTCGAAAATGGTTGATCCCCGCTTAAATGGATCCTATTCTATGAAGTCCTTATCACGGTTTGCAGATATTGTTTCTTCATGTATTCAGCGTGAACCCGAATTCCGGCCAGCTATGTCTGAAATAGTTCAGGATCTCTTGCTGACGATGTAA 2142 0.4272 MGFLNLGLHVQIFVTSMILILMAAFCVADTDPVDVAAINSLYVAMNSPPLQGWKPVGGDPCLELWQGVDCVFTNITAIRLGGLNLGGELGSNLDFPSIIDIDLSNNHIGGAIPFTLPPTLRTLSLSGNKLNGSIPDALSLLTQLSNLDLANNNLTGQLPSSMGSLSSLTTLLLQNNQLVGTLFVLQGLPLQDLNIENNLFSGPIPPNLLSIPNFSKNGNPFNTTIIPSPPVAAAPSPVAIGRSPEESPWHVAYSPADFTASMPGNVKKSFLANHVIWIAGAGLLIFIALGICLLMVWCCKRKPKNKNPQKLDVEAFPKTLHKPTRNDPVFETTNQDGKAEKIYRLNEVPNRRTSSIPKVPDQQEVYVNKVSATSEYNNVSKPSLLQPPPHSLPSIPGEKVIVNPASTTKSTERQVMTSSVKIYTVASLQQYTNSFSQENRIGEGTLGSVYRAELPDGKMLAVKKLDATAFKDQNDEQFLQLVSSISKIKHANIAKLVGYCAEYNQRLLIFEYCNNGTLHDALQGDDEHCIKFPWNARIKVALGAARALEYLHENFQPPIVHRNFRSANVLLNEKYEVRVSDCGLGHLLSSGTAGQLSGRLLTAYGYSAPEFESGSYTQQSDVFSFGVVMLELLTGRKSYDRSRPRAEQFLVRWAIPQLHDIDALSKMVDPRLNGSYSMKSLSRFADIVSSCIQREPEFRPAMSEIVQDLLLTM 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00377 713 ProSiteProfiles Leucine-rich repeat profile. 119 141 IPR001611 GO:0005515
Mepo6g00377 713 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 513 713 - -
Mepo6g00377 713 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 402 512 - -
Mepo6g00377 713 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 143 232 - -
Mepo6g00377 713 ProSiteProfiles Protein kinase domain profile. 435 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00377 713 SUPERFAMILY Protein kinase-like (PK-like) 410 710 IPR011009 -
Mepo6g00377 713 Gene3D Phosphorylase Kinase; domain 1 398 512 - -
Mepo6g00377 713 Gene3D Transferase(Phosphotransferase) domain 1 513 711 - -
Mepo6g00377 713 Gene3D Ribonuclease Inhibitor 35 229 IPR032675 -
Mepo6g00377 713 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 31 142 - -
Mepo6g00377 713 Pfam Protein tyrosine and serine/threonine kinase 437 709 IPR001245 GO:0004672|GO:0006468
Mepo6g00377 713 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 19 709 IPR046959 -
Mepo6g00377 713 SUPERFAMILY L domain-like 34 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00377 Mepo-Chr6 3851423 3857430 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00377 20 710 Strubbelig Receptor Gene Family AT4G03390 50.868 0.0 646
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Mepo6g00377 PK_Tyr_Ser-Thr 3.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00377 - - gmx:100793423 990.719