Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00346 ATGTTGAGTTTGGGTTTCTGTGAACGTTTTTGTAAAACTCTTCGTGACAATCGTAGAGCCATTAAGTTTGTTCTCGTCGGCACCGCCGTAAGTGGTGTTGGTTATGTGGCGTATCGCGAGTTTTATCCATCGGAAGTGGAGGCGGTTACCGATAGGAAAAAAGTGGTGGTACTGGGAACAGGATGGGCGGCAACAAGTTTCATGAAGAATCTGGACAGTCCAAAGTATGAAGTACAGGTGGTTTCGCCTCGTAACTATTTTGCATTCACTCCTTTGCTTCCTAGCGTCACTTGCGGCACTGTTGAAGCGCGTAGCATTGTTGAACCTGTTCGCAATATTTTTAGGAAGAAAAAGGTGGACGTGCAATTCAGTGAAGCAGAATGTTTCAAGATTGATGCTGAAAATAAGATAGTTTACTGTAGATCTAATGCAAACAACAATCTTACTGGGCAAGAAGAATTTGTCGTGGACTATGATTACCTAATCATTGGTGTGGGTGCTAAAGTTAACACATTTAACACACCAGGGGTGGTGGAGAATTGCCATTTTTTGAAGGAAGTTGAAGATGCACAGAAGATTAGAAGAACGGTCATTGACTGCTTCGAGAGAGCGAATTTGCCTGATGTAAGCGAGGAAGAAAAGAAGAGAATTCTTCATTTTGCTATTGTTGGAGGAGGGCCAACTGGAGTGGAGTTTGCAGCTTCACTTCATGACTTTGTCAATGAGGATTTAGTCCGTTTATATCCTGGGGTCAAAGATTTAGTAAAAATTACACTTCTGGAAGCTGGAGATCATATTTTGAGCATGTTTGATAAAAGGATAACAGCTTTTGCCGAAGACAAGTTTCAAAGAGATGGGATTGATGTGAAAACAGGATCCATGGTTGTGAAGGTAAATGAGAAAGAAATTTCCACTAAAGAGCTGAAAAATGGAGGAAAGATTACTACAATTCCATATGGAATGGCTGTCTGGTCAACTGGTATTGGCACTCGTCCATTTATCAAAGATTTCATGGCCCAAATTGGTCAGGCTAGCCGGCGTGCTCTAGCTACTGATGAATGGTTGAGAGTCGAAGGGTGCAACAATGTATATGCGCTTGGTGATTGTGCTACGATAAATCAGCGTAAAGTCATGGAAGATATTGCTTCAATCTTTAAGAAGGCCGACAAAGGCAATTCAGGAACACTTACGGTCAAAGAATTTCAAGAGGTCATGGATGACATTTGTGTACGATATCCTCAGGTTGAGCTGTATCTGAAAAATAAACAGATGCGCAACATTGCTGATTTATTGAAGGAAGCCAAGGGAGATGTTGAAAAAGAATCAATTAAACTGAATATCGAAGAACTCAAAACAGCACTTTCCAAAGTGGATTCTCAGATGAAATTTCTCCCTGCTACTGCACAGGTTGCATCTCAGCAAGGAACTTACCTGGCCAAATGTTTTAACCGGATGGAAGAGTGTGAGGAAAATCCAGAGGGTCCTCTCAGGTTCAGGGGAGAAGGTCGTCACCGCTTCAAACCCTTCAGGTATCAACACTTAGGTCAGTTTGCTCCTTTGGGAGGAGAGAAAACAGCTGCCCAGCTTCCTGGGGATTGGGTTTCAATTGGTCACAGCAGTCAATGGTTGTGGTATTCTGTCTATGCAAGCAAGCAAGTTAGCTGGCGTACAAGGGCCTTAGTAGTTTCAGACTGGGGAAGGCGTTTCATTTTTGGGAGGGACTCGAGCCGCATCTGA 1737 0.4295 MLSLGFCERFCKTLRDNRRAIKFVLVGTAVSGVGYVAYREFYPSEVEAVTDRKKVVVLGTGWAATSFMKNLDSPKYEVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIFRKKKVDVQFSEAECFKIDAENKIVYCRSNANNNLTGQEEFVVDYDYLIIGVGAKVNTFNTPGVVENCHFLKEVEDAQKIRRTVIDCFERANLPDVSEEEKKRILHFAIVGGGPTGVEFAASLHDFVNEDLVRLYPGVKDLVKITLLEAGDHILSMFDKRITAFAEDKFQRDGIDVKTGSMVVKVNEKEISTKELKNGGKITTIPYGMAVWSTGIGTRPFIKDFMAQIGQASRRALATDEWLRVEGCNNVYALGDCATINQRKVMEDIASIFKKADKGNSGTLTVKEFQEVMDDICVRYPQVELYLKNKQMRNIADLLKEAKGDVEKESIKLNIEELKTALSKVDSQMKFLPATAQVASQQGTYLAKCFNRMEECEENPEGPLRFRGEGRHRFKPFRYQHLGQFAPLGGEKTAAQLPGDWVSIGHSSQWLWYSVYASKQVSWRTRALVVSDWGRRFIFGRDSSRI 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00346 578 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 43 405 - -
Mepo6g00346 578 ProSiteProfiles EF-hand calcium-binding domain profile. 376 411 IPR002048 GO:0005509
Mepo6g00346 578 SUPERFAMILY FAD/NAD(P)-binding domain 53 271 IPR036188 -
Mepo6g00346 578 Coils Coil 440 460 - -
Mepo6g00346 578 Gene3D - 420 577 - -
Mepo6g00346 578 Gene3D - 45 407 - -
Mepo6g00346 578 PANTHER NADH DEHYDROGENASE 50 578 IPR045024 GO:0003954|GO:0006116
Mepo6g00346 578 Pfam Pyridine nucleotide-disulphide oxidoreductase 53 378 IPR023753 GO:0016491
Mepo6g00346 578 SUPERFAMILY FAD/NAD(P)-binding domain 219 373 IPR036188 -
Mepo6g00346 578 SUPERFAMILY EF-hand 369 465 IPR011992 -
Mepo6g00346 578 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 422 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00346 Mepo-Chr6 3565960 3570588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00346 1 578 Chloroplast and Mitochondria Gene Families AT4G21490 72.213 0.0 853
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00346 K03885 - gmx:100797657 1016.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g03359 2 43239736 43244486 Mepo6g00346 6 3565960 3570588 PCT