Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00343 ATGCGTCCACCAATAAAGAGAGTCGATTACAAGGTTGGAGACAAAGTAGAAGTATGCAGCAAAGAAGAAGGGCTTGTAGGTTCATACTATGAAGGCACGATCGTTTCATGTCTTGATGGGAGGGGAAAATATATAGTACGCTACAAGAACCTTCTTAAAGATAATGAGTCTGAACTTCTCACTAAAATATTTTTTCCAAAGGATCTTCGTCCAATACCACCACGTGTTCGTAGGCCTTCTAAGTTCCAACTCAACCAAAAAGTTGATGTTTTTGACAACGATAGTTGGTGGGTAGGGGAAATCACTAGCGAGAAGATTCTCATGCAAAAGACTTATTACGATAGTGTGTATTTTAACTATACCAATCAAACAATCTACTACCCGTGTGATCAAATTAGGGTTCATCAAGAGTTGTCTTGTGGAGAGTAG 429 0.3916 MRPPIKRVDYKVGDKVEVCSKEEGLVGSYYEGTIVSCLDGRGKYIVRYKNLLKDNESELLTKIFFPKDLRPIPPRVRRPSKFQLNQKVDVFDNDSWWVGEITSEKILMQKTYYDSVYFNYTNQTIYYPCDQIRVHQELSCGE 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00343 142 Pfam Agenet domain 13 74 IPR008395 -
Mepo6g00343 142 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 10 138 - -
Mepo6g00343 142 CDD Tudor_Agenet_AtDUF_rpt1_3 10 64 - -
Mepo6g00343 142 SMART agenet_At_2 8 77 IPR014002 -
Mepo6g00343 142 SMART agenet_At_2 80 140 IPR014002 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00343 Mepo-Chr6 3551931 3552359 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00343 20 99 PHD Transcription Factor Family AT5G58610 34.000 3.42e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00343 - - tpra:123923978 188.348