Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00339 ATGAAGTCACCAGCCCAAAGTAGTGAGAACAGACGGCCCATGGTACATACATGGCCCATCCATGAGATAACAACAGCAAGCACAACAGTTGTCGTCGAGCTGAATGACCGATGCAGTGTTTGCAACCAAGCTTTTCCATCTTATCAAGCACTTGGTGGTCACAAAGCCAGCCACCGTAAATCCTCATCCGAAAACCAAGCTCTTGGTGGACACAAACGGTGCCACTACAACGACGGTAAGAACAACCACAATAACAGCAACATCAACGTCAATGTTACTAACAACGGTGGAGTTACAATCTCTGACGGCGCCGCCACATCCTCTTCCATTAGCCACCGTGGCTTTGACCTCAACTTACATGTGCCTCTCACTAAATTATGGACTCCGGCAAGATTCGACGGTGGAGATTCCAAGAAGAACAAGGTTAATGTTAATCTGGCCGGAATCGATGAACCAGAGGTGAAAAGGGAAAGTCCCCTTCTCAATCGCGTTTCGCTTCTTCAAATCTATATGTCCCTTTTATTAATCAATTTTTAA 537 0.46 MKSPAQSSENRRPMVHTWPIHEITTASTTVVVELNDRCSVCNQAFPSYQALGGHKASHRKSSSENQALGGHKRCHYNDGKNNHNNSNINVNVTNNGGVTISDGAATSSSISHRGFDLNLHVPLTKLWTPARFDGGDSKKNKVNVNLAGIDEPEVKRESPLLNRVSLLQIYMSLLLINF 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00339 178 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 17 63 IPR044653 GO:0003700
Mepo6g00339 178 MobiDBLite consensus disorder prediction 54 83 - -
Mepo6g00339 178 ProSitePatterns Zinc finger C2H2 type domain signature. 38 58 IPR013087 -
Mepo6g00339 178 Pfam C2H2-type zinc finger 66 76 - -
Mepo6g00339 178 Pfam C2H2-type zinc finger 37 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00339 Mepo-Chr6 3514153 3516056 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00339 30 119 C2H2 Transcription Factor Family AT1G27730 38.168 1.94e-17 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00339 - - psat:127091014 117.857