Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00337 ATGGTGAAAAAATCAACGAAGGAAGAATGTCCACCGGACCATCTCCGGTGCAGCCGTACCGACGGCCGACAATGGCGGTGCAAACGTCGAGCGATGGAAAACGTGAAGTTATGCGAAGTTCATCATCTTCAACTTCAACATCGTCAGAAGAAAGTGAAGGTTCCAGAGTCGTTGAAGCTTCAGAGAAATATGAAGACGAAGAAGAAGAAGCAAAACGACGTCGTTGAGGTTGAAATTAGGTCAAACAAGAAAAAGAAGAAAAGTAAGAAAAACGATGTTGTTGATGTGCAATTGGATTTGATAAGAATGGTGTTACAGAGAGAGGTTGAGAAGAAGAAGAATCCGAATAAGAAGAATGTGACGATTGTTGATGAAGAATTGGAATTGGTGAAAGTGAATTACAGTGAAGGTGAATTGAGGAAAGAATTGCCTAATGGGGTTATGGAAATTGCTCCTGTTTCAACTTCACATCGTCGTGATGATGATGATGTTGTTGATTTTCACTGTAATGGTAAAGCTGTTGTTACACCACCTTACTTCAGGTCCAAGAATGTTGATAGAAGGGTTCCCATTGATAATTTTCATGTTTTGAAGAAGTGTAGGAGGAAGAAGTGTCATTGGTGTCAGAGTAGTGATTCTTTGAATTTGATAAAGTGTAACAACTGCCAGAAAGAGTTTTTCTGCATGGATTGCATTAAACAACGGTATTTCGACACTCAAAATGAGGTTAAGAAGGCGTGTCCAGTTTGTCGAGGAACTTGTTCATGTAAAGATTGCCAAGCAAGTCAGTGTAAAGACCGTGAAAGTAAGGATTGTTTGGCTGGTACAAGCAGAGTTGATAGGATATTGCATTTTCATTATTTGGTCTGTATGCTCCTTCCAGTAATAAAACAAATAAGTGAAGACCAGCATGCAGAGCTAGAAACAGAAGCGAAAAATAAAGGGGAAAGTATTTCTGATATTCTCATCAAGCAAATCGAATTTGACTGCAATGAGAAAATTGACTGCAACTACTGCAAAACACCTATTCTGAATCTTCACAGAAGCTGCCTTAACTGTTCCTACAGTCTTTGCTTAAGATGTTGTCAGACATTAAGTCAAGGAAGCCCCTTTGAGCATATAAATTCTCCATTGACCGAGTTACCTGACAAAATGGACACTTGCATTGCTGATGAAAGTTGCCTTTTCGAAGACAAGAGCATTTCTAGCGACAATGAAACTGATACGTCAATGTTACTGGATTCGACTGGTTTTAATGGTACAACTGACAGTATATCATGCCCTCCTTCAGAGCTAGGTGGTTGTGGTAATGACAACCTTGATTTGAGATGTGTTTTTCCCATAAGCTGGATCGAAGAAATGGAAGCTAAGGCTGAAGAGATAGTTTGCAGCTATGACGTTCCTGAAATTTTGGATAAAAACTCAAGTTGCTCACTCTGTATTGACAAAGATCATAAAACTAACAGACATAAGCAATTTGAAGAAGCTGCTCGAAGAGAAGATTCTAATGATAATTGCTTATTTTATCCTACAGTTTTCGACATCAATTGCGATCACTTTGAACACTTTCAGAAACACTGGGGAAAAGGCCATCCTGTAGTAGTCCGAGACGTGCTCCGAAGTACGAAAAAACTAAGTTGGGATCCTCTGGTCTTGTTCTGTGCTTATCTTGAAAGGAGCATTGCAAGATATGAGAATAATAAAGACTTACTTGAAGCTTGTTTGGATTGGTGGGAGGTTGAAATTAACATTAGACAGCATTTTACTGGCTCTCTGAAATATCAACCTCGGAAAAATGATTGGCATGAGACGCTGAAACTAAATGGATGGTTATCTTCCCAACTATTCAAAGAACAGTTTCCAGCTCATTTTGCTGAAGTAATTGGTGCTCTTCCACTTCAAGAATACATGAATCCGAGGTTCGGTCTTCTGAATTTAGCTGCAAATATGCCAGAGGGGAGAGCAATACATGATAAAGGCCCATATGTGTACATTTCTTATGGCTGTGCTGACAACAAAGCTTATTCTGTGCTAAATCTCTCTTATGACTCATATGATGTGGTTAATATTATGGTTTATACCACAGATGTTCCTGTCTCTACAGAACATCTTACTAAAATAACGAAATTATTGAAGAAGCACAGAACTCTGTGTCAAAGGGGGTCACCAAACATTACTGCTGAAAATGCAGAAGACGCGGAACAAAAGGTACCAGAGAGTATTGTAAGCGAAGGAACCGACTTTTACAGGAGAGTCAATAGAACATCTTACATCTCTACTGAAGTGAAAACAATAGCTAGTCAAAGTTTAGAGATCAATACGTCCAGCAATGGAGAATCTGGTTCTGATACTGAAAAAGCAGAAAGCTCTTTACCTTTCCATAAGACAGATCAAAGCACTGAAATGTATTCTGTTGCTCAGTGGGATGTCTTCCGGAGACAGGATGTACCGAAGCTTTTAGAATACCTCAAAAGACACAGGGATGAATTATGTTATACCAATGAATATGACAGCAATAAGATAGTTCACCCAATTCTTGATCAGAGCATCTTTCTGGACAATACTCACAAAATGAGACTGAAAGAGGAGTTCGAAATCGAACCATGGACATTTGAGCAACATGTTGGAGAAGCTATCATCATTCCTGCTGGATGTCCATACCAGATTAGGAATTCTAAGTATTGTGTTCAAGTGGTATTGGAATTTATGTCTTCTGAGAGTGTTGCTGAGTGTATCCAATTGACTGATGAGATCCATCTGCTTCCAGAAAACCACAAAGCAAAAGTAGACAAGATTGAGGTGAAGAAATTGGCTCTTCATAGCATGGATATGGCGATAAAAGAAATACGCGAGCTCACTTCCAATCCAAAACATGATTGA 2880 0.3917 MVKKSTKEECPPDHLRCSRTDGRQWRCKRRAMENVKLCEVHHLQLQHRQKKVKVPESLKLQRNMKTKKKKQNDVVEVEIRSNKKKKKSKKNDVVDVQLDLIRMVLQREVEKKKNPNKKNVTIVDEELELVKVNYSEGELRKELPNGVMEIAPVSTSHRRDDDDVVDFHCNGKAVVTPPYFRSKNVDRRVPIDNFHVLKKCRRKKCHWCQSSDSLNLIKCNNCQKEFFCMDCIKQRYFDTQNEVKKACPVCRGTCSCKDCQASQCKDRESKDCLAGTSRVDRILHFHYLVCMLLPVIKQISEDQHAELETEAKNKGESISDILIKQIEFDCNEKIDCNYCKTPILNLHRSCLNCSYSLCLRCCQTLSQGSPFEHINSPLTELPDKMDTCIADESCLFEDKSISSDNETDTSMLLDSTGFNGTTDSISCPPSELGGCGNDNLDLRCVFPISWIEEMEAKAEEIVCSYDVPEILDKNSSCSLCIDKDHKTNRHKQFEEAARREDSNDNCLFYPTVFDINCDHFEHFQKHWGKGHPVVVRDVLRSTKKLSWDPLVLFCAYLERSIARYENNKDLLEACLDWWEVEINIRQHFTGSLKYQPRKNDWHETLKLNGWLSSQLFKEQFPAHFAEVIGALPLQEYMNPRFGLLNLAANMPEGRAIHDKGPYVYISYGCADNKAYSVLNLSYDSYDVVNIMVYTTDVPVSTEHLTKITKLLKKHRTLCQRGSPNITAENAEDAEQKVPESIVSEGTDFYRRVNRTSYISTEVKTIASQSLEINTSSNGESGSDTEKAESSLPFHKTDQSTEMYSVAQWDVFRRQDVPKLLEYLKRHRDELCYTNEYDSNKIVHPILDQSIFLDNTHKMRLKEEFEIEPWTFEQHVGEAIIIPAGCPYQIRNSKYCVQVVLEFMSSESVAECIQLTDEIHLLPENHKAKVDKIEVKKLALHSMDMAIKEIRELTSNPKHD 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00337 959 Pfam JmjC domain, hydroxylase 790 901 IPR003347 -
Mepo6g00337 959 ProSiteProfiles JmjC domain profile. 639 919 IPR003347 -
Mepo6g00337 959 Pfam WRC 12 53 IPR014977 -
Mepo6g00337 959 SUPERFAMILY Clavaminate synthase-like 519 948 - -
Mepo6g00337 959 ProSitePatterns TNFR/NGFR family cysteine-rich region signature. 231 272 IPR001368 GO:0005515
Mepo6g00337 959 ProSiteProfiles WRC domain profile. 11 55 IPR014977 -
Mepo6g00337 959 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 12 955 IPR045109 GO:0032454|GO:0033169
Mepo6g00337 959 Gene3D Cupin 511 928 - -
Mepo6g00337 959 SMART cupin_9 620 919 IPR003347 -
Mepo6g00337 959 ProSiteProfiles Zinc finger RING-type profile. 205 251 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00337 Mepo-Chr6 3495271 3500769 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mepo6g00337 JmjC 1.6e-10 CL0029
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g03370 2 43414108 43420886 Mepo6g00337 6 3495271 3500769 PCT