Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00335 ATGAACTTTTTGGGTCTGCTCGGAATTCATGTTGAAAGAGGAGTCAATCTTGCTATCAGGGATGTAATCAGCAGTGATCCTTATGTTATCATCAAAATGGGAAAACAAAAGCTGAAAACTAGGGTAGTGAAGAAGAATCTAAATCCTGAGTGGAATGACAACTTGACCTTAACCATTTCAGATCCTCATACTCCAATTTATCTATATGTGTACGATAAGGACAGATTTAGCATGGATGACAAAATGGGGGATGCTGAGTTTGACATCAGTCCATTTGTGGAAGCAGTAAAGATGCGATTGGAAGGTCTCCCAAATGATACTATAATTACAAGGGTGCAACCTAGCAGACAGAACTGTTTAGCAGGAGAGAGTCACATTGTTTTGAAAGATGGTAAAGTTGTCCAAAACATGGTTCTTAGATTAAGAAATGTTGAATGTGGGGAAATGGAGATTCTATTGCATTGGATTGACATCCCTGGTTCTAAGGGTCTTTAG 495 0.3879 MNFLGLLGIHVERGVNLAIRDVISSDPYVIIKMGKQKLKTRVVKKNLNPEWNDNLTLTISDPHTPIYLYVYDKDRFSMDDKMGDAEFDISPFVEAVKMRLEGLPNDTIITRVQPSRQNCLAGESHIVLKDGKVVQNMVLRLRNVECGEMEILLHWIDIPGSKGL 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00335 164 Pfam C2 domain 6 91 IPR000008 -
Mepo6g00335 164 Gene3D C2 domain 4 161 IPR035892 -
Mepo6g00335 164 ProSiteProfiles C2 domain profile. 1 102 IPR000008 -
Mepo6g00335 164 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 2 162 IPR044562 -
Mepo6g00335 164 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 99 IPR035892 -
Mepo6g00335 164 CDD C2_ArfGAP 4 147 - -
Mepo6g00335 164 SMART C2_3c 6 101 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00335 Mepo-Chr6 3475009 3475503 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00335 37 164 C2H2 Transcription Factor Family AT1G70790 59.231 3.88e-52 161