Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00332 ATGGACTTTGATCTTGAGAACCCTTTATCCAGCTTCAAAGAACAGCAAAACTGTACTATATCAGAACTCTTTGCTTTAGAAACTGATCATATGCCCTCATCAAACTGCTTGAATTCAACACATTGTGAAGCCATTTCTCTCATACTTCAGGTTCAGCATTCTTGCAATTTGGATCCATTTGTAGTTTATCTTGGTATAAATTACTTGCACCGTTTTATGTCGAAGCAAGAATTTTCGGGAAAGCCCTGGTTAATCAGGCTCATTGCCATATCATGTCTTTCTCTGGCTTCAAAAATGAAGAACACACATTTACCATTTTCTAAGTTGCAGAGAGAGGGTTGCAACTTCAATGGTGAAAATATACAAAAAATGGAACTAGTTATTCTTGGAGCTCTGAATTGGCGTATGAGGTCAATTACACCTTTTCCTTTCTTGAATTTCTTCATCTCTTTAGCTCAAATTAAAGACCAACCACTTAAAGATAGAGCTGCAGAGATAATCTTCAATGTTCATAATGACATTAAGTTTTTAGAGTATAAACCCTCAACTGTTGCAGCAGCTTCCCTTATCTATGCATCTTATGAACTATTCCCACAGCAATATTCTATTCTGACAGCTACAATTACAACTTCTGAGCATATAGACAAGGATACATTGGCCAAGTGCATTGATATGATGCATGATATGTGGAGAAATGAAGTAAAAGGGTCAATGAAAGATAGAAGCTTTTTAAGCACTGAAACTCCAGTGAGTGTGCTTGAAAGAAGCACCAAAAGGCAGAGAATTTGA 789 0.3663 MDFDLENPLSSFKEQQNCTISELFALETDHMPSSNCLNSTHCEAISLILQVQHSCNLDPFVVYLGINYLHRFMSKQEFSGKPWLIRLIAISCLSLASKMKNTHLPFSKLQREGCNFNGENIQKMELVILGALNWRMRSITPFPFLNFFISLAQIKDQPLKDRAAEIIFNVHNDIKFLEYKPSTVAAASLIYASYELFPQQYSILTATITTSEHIDKDTLAKCIDMMHDMWRNEVKGSMKDRSFLSTETPVSVLERSTKRQRI 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00332 262 FunFam D6-type cyclin 135 224 - -
Mepo6g00332 262 Pfam Cyclin, C-terminal domain 139 234 IPR004367 -
Mepo6g00332 262 SMART Cyclin_C_2 139 262 IPR004367 -
Mepo6g00332 262 Gene3D - 33 137 - -
Mepo6g00332 262 PANTHER CYCLINS 29 231 IPR039361 -
Mepo6g00332 262 SUPERFAMILY Cyclin-like 15 136 IPR036915 -
Mepo6g00332 262 Gene3D - 22 225 - -
Mepo6g00332 262 FunFam D6-type cyclin 27 134 - -
Mepo6g00332 262 Pfam Cyclin, N-terminal domain 38 136 IPR006671 -
Mepo6g00332 262 SMART cyclin_7 46 130 IPR013763 -
Mepo6g00332 262 SUPERFAMILY Cyclin-like 122 236 IPR036915 -
Mepo6g00332 262 CDD CYCLIN_AtCycD-like_rpt2 139 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00332 Mepo-Chr6 3451171 3453025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00332 1 255 Core Cell Cycle Gene Families AT4G03270 38.351 1.02e-57 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00332 K18812 - gmx:100799985 367.081