Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00329 ATGAAGAAGAAATGTGAGCTATGCAAAAGTCCAGCAAAGTTGTTCTGTGAATCAGATCAAGCAAGCCTTTGTTGGGAATGCGACGCTAAGGTTCACACTGCAAACTTCATAGTCACAAAGCATCACAGGTTTCTTCTCTGCCATATTTGTCAATCTCTAACTCCTTGGCATGGCACTGGACCCAAGTTTGTACCCACTATCTCCCTTTGCAATCACTGTAACAACAACAATGATGAAGATAATGATCAAGATGATGATGATGATGATACTGAGGATGATGATGAAGAAAATCAAGTGGTTCCATGGAAATCTACAACTCCACCACCAGTTTCTTCTTGTTCTTCAAATAGTGCAAACTAA 360 0.4 MKKKCELCKSPAKLFCESDQASLCWECDAKVHTANFIVTKHHRFLLCHICQSLTPWHGTGPKFVPTISLCNHCNNNNDEDNDQDDDDDDTEDDDEENQVVPWKSTTPPPVSSCSSNSAN 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00329 119 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 4 115 - -
Mepo6g00329 119 ProSiteProfiles Zinc finger B-box type profile. 1 46 IPR000315 GO:0008270
Mepo6g00329 119 SMART bboxneu5 1 46 IPR000315 GO:0008270
Mepo6g00329 119 Pfam B-box zinc finger 3 41 IPR000315 GO:0008270
Mepo6g00329 119 CDD Bbox1_BBX-like 4 46 - -
Mepo6g00329 119 MobiDBLite consensus disorder prediction 78 119 - -
Mepo6g00329 119 MobiDBLite consensus disorder prediction 79 96 - -
Mepo6g00329 119 MobiDBLite consensus disorder prediction 100 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00329 Mepo-Chr6 3420877 3421381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00329 1 73 C2C2-CO-like Transcription Factor Family AT4G27310 63.014 3.24e-31 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mepo6g00329 zf-B_box 2.9e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00329 - - cam:101492786 176.792