Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00319 ATGCTTTGTTTTCGCTCTTATTCCGTAGCTGTTAAGGAAGATTGTTACCGTATTCACCACTCTAAAAATCACAACCACGATGAAGAAAAACTAAGTTGGAGTGGCTATGAAGACGATTTCTACCAATTTCATCATATTGAAGAGCGTCAAATTAACACTATCTCAAACGGGTGTAAGGTAGATTGTGAAATGAGGAAAAACGTGGTAGATTTTTTGATAGACACACACTATGGTCTTGAACTTGCACCAGAAACCCTTTACCTATCTGTCAACGTTCTTGATCGGTTTCTTTTCAAATCCAATTTTGAAGCAATAACAAAGAAGAAATTTGAATTTCTCGGCCTCGCCTCGTTGCTGTTAGCTTCCAAGTATGAAGAAAGAGGTAAACTTGGTGTTTATGAGTTGGAATACATAACACAATATTCTTGTACTTCAGATGAAATACGTGATATAGAGCATGTTATTCTGCAAAAGCTTGATTGGGTTTTAACAGTTCCAACACCTTATGTATTTCTTGTCAGAAACATTAAGGTGTGTCTTTTATCTGACGAGGACAAAATCATGGAGAATATGGTTATTTTCTTTTCTGAGCTCAGTTTGACGCACTATTCAATTGTGTGTGATTATAAACCTTCTATAATTGCTGCTTCTGCTGTGTATTGTGCAAGAATTGTTCTTAAAAGGTACCCCGTTTGGAGCAAGGCTTTGAAGATTTGCACAAGGTACTCTGAGAAGAAGTTAAGATCTTGTGCTAAGGTTATGATGAAATTGTGCAATGAAACTTGTAGAGATGGAAGCATGGATGTTTTTAGCAAATTTTCAAGTCCAGATTATTTTAAGGTTGCATGTGTTGCTCAACAAGAATTCTCCAACAATCGTTTTAATCCTAGAATTTTATCATTGTTCTTTTAG 912 0.3575 MLCFRSYSVAVKEDCYRIHHSKNHNHDEEKLSWSGYEDDFYQFHHIEERQINTISNGCKVDCEMRKNVVDFLIDTHYGLELAPETLYLSVNVLDRFLFKSNFEAITKKKFEFLGLASLLLASKYEERGKLGVYELEYITQYSCTSDEIRDIEHVILQKLDWVLTVPTPYVFLVRNIKVCLLSDEDKIMENMVIFFSELSLTHYSIVCDYKPSIIAASAVYCARIVLKRYPVWSKALKICTRYSEKKLRSCAKVMMKLCNETCRDGSMDVFSKFSSPDYFKVACVAQQEFSNNRFNPRILSLFF 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00319 303 ProSitePatterns Cyclins signature. 65 96 IPR006671 -
Mepo6g00319 303 PIRSF Cyclin_A_B_D_E 5 296 IPR046965 GO:0016538|GO:0044772
Mepo6g00319 303 Gene3D - 165 283 - -
Mepo6g00319 303 SUPERFAMILY Cyclin-like 165 286 IPR036915 -
Mepo6g00319 303 PANTHER CYCLINS 33 256 IPR039361 -
Mepo6g00319 303 Pfam Cyclin, C-terminal domain 166 284 IPR004367 -
Mepo6g00319 303 SUPERFAMILY Cyclin-like 33 161 IPR036915 -
Mepo6g00319 303 Gene3D - 53 164 - -
Mepo6g00319 303 FunFam G2/mitotic-specific cyclin 49 164 - -
Mepo6g00319 303 Pfam Cyclin, N-terminal domain 55 163 IPR006671 -
Mepo6g00319 303 SMART Cyclin_C_2 166 287 IPR004367 -
Mepo6g00319 303 SMART cyclin_7 70 157 IPR013763 -
Mepo6g00319 303 SMART cyclin_7 170 256 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00319 Mepo-Chr6 3326954 3327865 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00319 36 284 Core Cell Cycle Gene Families AT2G26760 36.111 1.85e-49 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00319 K21777 - cave:132164002 192.2