LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo6g00316	ATGGTTCAAAGAAAGGTTTCAAGCAAGCTTGGTATCCAAAGTGAACATGTTAAATCAGATAAACGTTTAGCAAACATGAAACTATCTTCTTCTTCTTCATCTCATCAACACTTAGATGGAAAAACTAAAGTTTCTGATATGAAGAAGAAAATGAAGAAATCAAAGTCAATCAAGCTTTCTGATCTTGAAGCTCTTCAATCTTCACCTTCATCGGTTCCGAGTTCGACAAAAGCAGCTCCTGCCTCACCACAAAAACAGCATCCCTTGGTGAGAACAACTCCAGATGGTTCACCAAATTACATGAAGCCAACAAGCAGTTCACATGCAAAGAAGGAACTTTTCTCTGTAAGTCTTAGAAAAACTCAATCTGGTTCTGATTTTAATAGAAAATATTCAAGTGATTCAAAAGCTACATGTAAAAAACCTACAAAAGCTTTGATAAGATCAACTAGTTTGAGTTTGGTTAGAACATTGACAAAGACTACTAGCTTTAAGGCTTCTAGAACTTCTTGTCCTAGAAAATCAACAAGAGCTACTTGCTCTTCAACTTTGAAAGATTCAAGCTTTCCTTCATACCTTATGCTTAATCCTGGTGGAACTGAGTTGGAAGGAACTTCAGTTATGAAGGTTTGTTCATATACTTATTGTTCTCTTAATGGTCATCATCATCATGCTGATTTGCCTCCTTTGAAGACTTTTATGTCTTCAAGGAGGCGCGTCTTGAAGCGTGTGAAGCTCGAAGCTCTAAGCCCTCGAAGTCGAAGATTGAAGGCTGGTGAGACAGAAAAGAATGAATCTGATGTTGAGAAGAGTTCCTTTGATTCAAAACCATCATATGATGAAGCTGACATGGATTTCTTCATTGAAATCTATGATAATGAGAAAAAGGATGCAAAATCAACAGGTGAAGAAGTAATTGGAAAAACCGATTTTCTCAAAGAGGTTGAGGATCATGAAGATACCATCAAGTCTACAATTGAAAATGATGGCATAGAAGTAGGATTTCTGAAAGAGGTTGAAGATCTAAAGAAAAATGAAGATGTAGATGAAGATCAACAAACTAGTTGGTCTCATGAAGAAATGAGCATGGAAGATGTTCACCATAACATGGATGATTCTGATTCGGGATCCGAAGATATGCAGTGTGATGAAGAACAATATTATGGATATGATCATGAAAATTATGCTGATTCTTCTGTTTACACAGATGAGGAGAATGACTCAAAAGCTGAATCGTTATCTGAAAGTTCTCATGATGTATCAGTAACATGGTTAGATGATATCCTTAGCAGCTATTATGATGACATTATTCTTGTTGATGAAACACTCAAAGAAGCGAAATCAGAAGAAATCATCTATCTTGAAGATCAACCTCATAATGAAATGATCGGTTTTGTCCTTGAAGACAAGATTGGAAGCAATGAGACTCAAGAAATTGGTTACTCCTCTGACGACATCGGCTGCTACCAATCTTCCCTGGCAAATGAAATATTTGATTACCTGACAAATGCCGAAGAAAATGTTTACGAGACAAGCCAAGAGAACGAAGATGATGACATCAATAAAAAGGAGAAGCATGATATTCAATTATTTGACGTGCTTGAAGGAAGCATCAAAGATATTCAAGATCAAGGAAAAGGTAATAAAAGAGCAAGTTGCATAGTTGATGACGAGGAAAACACAAGAGAGAATTGGAAAGGTGTGATTAGAAGAAAGAGGTGTGTTGAAGAGGATGATGATGAAATGAGAAATTTCAATCCAAGAGAGCCGAATTTCCTTCCATTGGTTCCTGAAAAAGAAAAGGAAAAGGTTGATTTGAGGCATCAAATGATGGATGAAAGAAAGAATGCAGAGGATTGGATGGTTGATTGTGCACTAAGACAAGTTGTTAACAAGCTTGCTCCTGCTAGGAAGAAGAAAGTGGCATTGCTAGTTGAAGCCTTTGAAACTGTATTACCAAAATGTGAGTCACATTTGAGAAACAAATCAGGGTTTGCTCATGGTAGACACATTCAAGCTTGTAGATGA	2028	0.3674	MVQRKVSSKLGIQSEHVKSDKRLANMKLSSSSSSHQHLDGKTKVSDMKKKMKKSKSIKLSDLEALQSSPSSVPSSTKAAPASPQKQHPLVRTTPDGSPNYMKPTSSSHAKKELFSVSLRKTQSGSDFNRKYSSDSKATCKKPTKALIRSTSLSLVRTLTKTTSFKASRTSCPRKSTRATCSSTLKDSSFPSYLMLNPGGTELEGTSVMKVCSYTYCSLNGHHHHADLPPLKTFMSSRRRVLKRVKLEALSPRSRRLKAGETEKNESDVEKSSFDSKPSYDEADMDFFIEIYDNEKKDAKSTGEEVIGKTDFLKEVEDHEDTIKSTIENDGIEVGFLKEVEDLKKNEDVDEDQQTSWSHEEMSMEDVHHNMDDSDSGSEDMQCDEEQYYGYDHENYADSSVYTDEENDSKAESLSESSHDVSVTWLDDILSSYYDDIILVDETLKEAKSEEIIYLEDQPHNEMIGFVLEDKIGSNETQEIGYSSDDIGCYQSSLANEIFDYLTNAEENVYETSQENEDDDINKKEKHDIQLFDVLEGSIKDIQDQGKGNKRASCIVDDEENTRENWKGVIRRKRCVEEDDDEMRNFNPREPNFLPLVPEKEKEKVDLRHQMMDERKNAEDWMVDCALRQVVNKLAPARKKKVALLVEAFETVLPKCESHLRNKSGFAHGRHIQACR	675

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo6g00316	675	MobiDBLite	consensus disorder prediction	60	115	-	-
	Mepo6g00316	675	MobiDBLite	consensus disorder prediction	252	277	-	-
	Mepo6g00316	675	Pfam	Plant calmodulin-binding domain	555	653	IPR012417	GO:0005516
	Mepo6g00316	675	PANTHER	CALMODULIN-BINDING PROTEIN-RELATED	1	527	IPR044681	GO:0005516
	Mepo6g00316	675	MobiDBLite	consensus disorder prediction	342	362	-	-
	Mepo6g00316	675	MobiDBLite	consensus disorder prediction	24	38	-	-
	Mepo6g00316	675	SMART	CaM_binding_2	542	653	IPR012417	GO:0005516
	Mepo6g00316	675	MobiDBLite	consensus disorder prediction	1	115	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo6g00316	Mepo-Chr6	3292756	3296168	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo6g00316	565	674	Calmodulin-binding Proteins	AT2G38800	57.658	1.20e-31	129