Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00305 ATGCAAGGTTTCTTCTTCTTGTTCTTCTTGTTCACCACTTCACTTTCTTTTCTAACCACAATTTCAACTTCAACAATCACAGACACCTTAACCTCATCACAAATTCTATTAACAAATCAGACCCTTGAATCATCCAACCATACATTTGTTCTTGGTTTCATCCCTGGAACAACTTCCAACAAAATTTACTTAGCCATATGGTACAAAAACATCGACGACACGATTGTTTGGGTCGCAAACAGAGACAACCCTCTTCAAAATTCAACCAATAGTCACCTCAAAATCGGTGACAATGGAAACATAGTACTTCTCAATTCATCATCAGATTCAGACAACAACCTCGTATGGTCTTCGAATCAAACAAAAGCCGCCAACCCACTTGTTCTTCAGCTTTTCGATAATGGAAATTTAGTTCTGAGAGAAACAAACGTGAATGATCCAACAAAATATCTATGGCAAAGCTTTGATCACCCAACAGATACTTTGTTACCATCCATGAACATGGGTTGGAACTTCGACAAAAACACGGAAAATCACTTAACATCGTGGAAGATCACTGGTGAAGATCCTTCAACGGGTCATTATTCATTCAAAATTGATTATCATGGTTTACCGGAGATTTTCCTACGGAATGATGATATCATAATATATCGAAGTGGACCATGGAATGGTGAAAGATTTAGTGGTGTACCAGAGATGCAACATGATACAGATTCAATAGTTTTCAATTTTTCATCAAACCAACACGGTGTTAACTACTCGTTTACCATCGGAAATCCATCCATTTTTTCTAGACTAGTTGTGCATTCGGGTGGTCAACTTCAACGTCGAACATGGGTGCAAAGTATGAAAACATGGACAAATTTTTGGTATGCACCAAAAGATCAATGTGATAATTACAGAGAATGTGGTCCTTATGGTTTATGTGACACAAATGCTTCACCTGTTTGTCAATGTGTGAAAGGTTTTAGTCCTAAGAATGAACAAGCTTGGAAATTGAGAGATGGGTCTGATGGGTGTGTGAGGAATAAGAATTTGGATTGTGAGAGTGATAAATTTTTACGTATGGAGAATGTGAAGTTGCCTGAGACAACCTCAGTTTTTGTGAACAAGACAATGGGGATTAAGGAATGTGGTGATTTGTGTCATAGGAATTGTTCTTGTACGGGTTATGCTAATGTTTATGTGACTAATGGTGGAAGTGGTTGTGTTATGTGGATTGGTGAACTTAATGATATTAGAGATTATCCTGATGGTGGACAAGATCTTTTTGTACGATTAGCAGCTTCTGAGCTAGATAGCACAGGATCTACTGGTGGCTCTGACAAGAAAAATCATAAAGCTGAGATTATAGGAATTACAATTTCTGCAGCTGTTATAATTTTGGGATTGGGTTTCCTTTTATGTAAGAGGAGGAAATTGCTAAGTAATAGGAAGAAAGACAACAGAGGTTCTCTCCAAAGAAGTAGAGATTTGTTAATGAATGAGGTGGTGTTTTCAAGTAAAAGAGAAACCTCTGGAGAAAGGAACATGGATGAATTAGACTTGCCAATGTTTGATTTTAATACCATAATATTAGCTACAAACAACTTCTTTGAAGCAAATAAACTTGGACAAGGAGGCTTTGGTAGTGTTTATAGGGGAAGGTTGATTGAAGGCCAAGAAATTGCTGTCAAGAGGCTATCACAAACTTCAGGGCAAGGAGTTGAAGAATTTAAGAATGAGGTCAAGTTAATTGCCAAGCTTCAACATAGAAATCTTGTTCGGCTATTAGGTTGCTGTGTTGACAGGGACGAGAAGCTTCTTGTATACGAGTATATGGAAAATAGAAGCCTTGATTCCATTTTGTTTGACAAAGCTAGAAAGCCCCTATTGGACTGGAAAAAGCGATTCGACATTATATGTGGAATAGCTAGAGGGCTTCTTTATCTGCATCATGATTCAAGACTCAGGATTATCCATAGGGATCTCAAGGCAAGCAACATTCTGCTTGACGGCGAAATGAATCCAAAAATATCAGACTTTGGGATGGCTAGAATATTTGGCAAAAATCAAACAGAAGCAAATACGTTGAGAGTTGTTGGAACATATGGCTATATGTCTCCTGAATATGCTATGGATGGAAACTTCTCAGTTAAATCAGATGTTTTTAGCTTTGGAGTTCTTGTGCTAGAGATCATAAGTGGAAAGAAAAATAGAGGATTCTACTATGCAAACGACGATATGAATCTTCTAAAGAATGCATGGGGACAGTGGAGAGAAGGCAATGCAATGGAACTCATTGATCCATCAATTGGAAATTCATACACAGAATCTGAAGTTCTTAGATGCATACATGTTGGACTATTATGTGTCCAAGAACGTGCAGAAGATAGGCCAACAATGCCTTCAGTGCTCTTGATGCTAGGCAGTGAAACTGCACTAATGCCAGAACCTAGAAGTCCAGGATTTTCGCTTGGAAGATCAAGGAATCCTCAAGAGACTGATTCCTCTTCAAGTAAGCAAGATGAAACATGGAGTGTGAACCAAGTTACAGTCACATTGCTAGATGCTAGGTAG 2559 0.3822 MQGFFFLFFLFTTSLSFLTTISTSTITDTLTSSQILLTNQTLESSNHTFVLGFIPGTTSNKIYLAIWYKNIDDTIVWVANRDNPLQNSTNSHLKIGDNGNIVLLNSSSDSDNNLVWSSNQTKAANPLVLQLFDNGNLVLRETNVNDPTKYLWQSFDHPTDTLLPSMNMGWNFDKNTENHLTSWKITGEDPSTGHYSFKIDYHGLPEIFLRNDDIIIYRSGPWNGERFSGVPEMQHDTDSIVFNFSSNQHGVNYSFTIGNPSIFSRLVVHSGGQLQRRTWVQSMKTWTNFWYAPKDQCDNYRECGPYGLCDTNASPVCQCVKGFSPKNEQAWKLRDGSDGCVRNKNLDCESDKFLRMENVKLPETTSVFVNKTMGIKECGDLCHRNCSCTGYANVYVTNGGSGCVMWIGELNDIRDYPDGGQDLFVRLAASELDSTGSTGGSDKKNHKAEIIGITISAAVIILGLGFLLCKRRKLLSNRKKDNRGSLQRSRDLLMNEVVFSSKRETSGERNMDELDLPMFDFNTIILATNNFFEANKLGQGGFGSVYRGRLIEGQEIAVKRLSQTSGQGVEEFKNEVKLIAKLQHRNLVRLLGCCVDRDEKLLVYEYMENRSLDSILFDKARKPLLDWKKRFDIICGIARGLLYLHHDSRLRIIHRDLKASNILLDGEMNPKISDFGMARIFGKNQTEANTLRVVGTYGYMSPEYAMDGNFSVKSDVFSFGVLVLEIISGKKNRGFYYANDDMNLLKNAWGQWREGNAMELIDPSIGNSYTESEVLRCIHVGLLCVQERAEDRPTMPSVLLMLGSETALMPEPRSPGFSLGRSRNPQETDSSSSKQDETWSVNQVTVTLLDAR 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00305 852 Gene3D Phosphorylase Kinase; domain 1 494 606 - -
Mepo6g00305 852 ProSiteProfiles Protein kinase domain profile. 531 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00305 852 SMART blect_4 33 158 IPR001480 -
Mepo6g00305 852 Pfam Domain of unknown function (DUF3403) 804 852 IPR021820 GO:0004674
Mepo6g00305 852 Pfam S-locus glycoprotein domain 217 327 IPR000858 GO:0048544
Mepo6g00305 852 MobiDBLite consensus disorder prediction 819 839 - -
Mepo6g00305 852 CDD STKc_IRAK 537 802 - -
Mepo6g00305 852 Pfam PAN-like domain 348 413 IPR003609 -
Mepo6g00305 852 SMART serkin_6 531 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00305 852 Gene3D - 22 156 IPR036426 -
Mepo6g00305 852 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 7 793 - -
Mepo6g00305 852 MobiDBLite consensus disorder prediction 810 839 - -
Mepo6g00305 852 Gene3D Transferase(Phosphotransferase) domain 1 607 809 - -
Mepo6g00305 852 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 607 810 - -
Mepo6g00305 852 ProSiteProfiles PAN/Apple domain profile. 348 428 IPR003609 -
Mepo6g00305 852 ProSitePatterns Protein kinases ATP-binding region signature. 537 559 IPR017441 GO:0005524
Mepo6g00305 852 SUPERFAMILY Protein kinase-like (PK-like) 513 802 IPR011009 -
Mepo6g00305 852 ProSitePatterns Serine/Threonine protein kinases active-site signature. 652 664 IPR008271 GO:0004672|GO:0006468
Mepo6g00305 852 SMART ntp_6 348 427 IPR003609 -
Mepo6g00305 852 Pfam Receptor serine/threonine kinase 487 521 IPR022126 GO:0004674
Mepo6g00305 852 Pfam Protein tyrosine and serine/threonine kinase 535 798 IPR001245 GO:0004672|GO:0006468
Mepo6g00305 852 Pfam D-mannose binding lectin 74 184 IPR001480 -
Mepo6g00305 852 PIRSF SRK 1 852 IPR024171 GO:0004674
Mepo6g00305 852 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 224 IPR036426 -
Mepo6g00305 852 CDD PAN_AP_plant 345 428 - -
Mepo6g00305 852 CDD B_lectin 33 158 IPR001480 -
Mepo6g00305 852 ProSiteProfiles Bulb-type lectin domain profile. 27 152 IPR001480 -
Mepo6g00305 852 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 495 606 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00305 Mepo-Chr6 3097803 3103434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00305 519 852 Receptor kinase-like Gene Family AT4G11530 59.347 1.54e-135 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo6g00305 PK_Tyr_Ser-Thr 1.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00305 - - gmx:100797331 1254.58