Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00304 ATGCTTGATAAAGTATCTTATGCAGCAGATACCTTGACTCAAAAATCTTCAATTATAGATGGCCAAGAACTTATTTCAGCTGGACAAATTTTTTGTCTTGGTTTCTTCAGTCCAGGTAGTTCCAAAAAGTACTACTTGGGGATATGGTACAAGAATATCACACCACAAACAGTTGTTTGGGTTGCAAACAGAGAAAAACCACTTAATAACTCAAGTGGAAACTTAACCATTGGTGTTGATGGGAATATTTTACTTGTCGATGGAGTAGGTAACAAAATATGGTATACAAATTCATCAAGATCAATTCAAGAGCCACTTGCAAAGTTGTTAGATTCTGGAAACTTGGTCTTGATGGATGGAGAGAACCATGATTCTAATAGTTACATTTGGCAAAGCTTTGATTATCCAACAGACACAATGTTACCTGGCATGAAGTTGGGTTGGGATAAAGCCTCGGGTCTTAATAGATATTTGACATCATGGAAGAGTGCAGATGATGATCCTTCTTATGGAAGTTTTACCTACAACTTTGATCATAAAGAATTTGCTGAGTTGGTTATTCGCCAAGGAAAGGACATCACATTTAGAAGCGGGATTTGGAATGGTGTTCGTTTTAATTCCGATGATTGGGCATCGTTTACAGGAGTTACAGCCTTCAAGCCACAACTTTCAGTAACCAAGAATGAGGTAGTGTATTGGGATGAACCTGGAGATAGACTGTCAAGGTTTATGATGAGAGATGATGGACTGTTGGAACGATATATATGGGATAGTAACATTGGTAAGTGGACTAAAATGTATGAGGCAAGAAAAGATTTATGTGATAATTATGGAGCATGTGGGATAAATGGTGTTTGTAATATTGATGATGTGCCTGTTTATTGTGATTGTTTGAAAGGCTTCAAACCTCGATCACAAGACGAATGGGATTCGTTTAATCGCTCTGGTGGGTGTATCAGGAAAACACCTTTGAACTGCACAGAAGCTGACAGGTTTCAGAAATTAAGCAGTGTGAAATTGCCTATGTTGTTGCAGTTCTGGACAAATAGTAGCATGAGTCTTGAAGAATGTGAGGTGAAGTGCTTGAAGGATTGTTCTTGCACTGCATATGCAAACTCTGCCATAAATGAAGGGCCTCATGGTTGCTTGATTTGGTTTGGGGACTTGATAGACATTAGGTTGTTTATAACTGAAGATAGTTTACAACTTGATCTTTATGTAAGGTTAGCTGCTTCCGAAATAGAGTCCACTGCTAGTGCTAGTAAAAGGAGAAAGTTGGCACTGATTATTTCAGTATCCTTGGCGGTGTTTGTTTTGTGTATCATTTTCTACATTTGTATGAAGTATGCTAAAGTAAGAAAACGGAAGACCACTGTTGATTTGGGACAAAGAAACCAGAACGAAGAACAAGCGTCACCTCTTTTTGATATAGATACCATTCTAGCTGCTACAGACAGTTTTTCTGTTGAGAACAAGATTGGTCAAGGGGGTTTTGGTCCAGTATACAAGGGTATATTGGCTCAAGGGCAAGAAATAGCTGTGAAAAGGCTATCAAAAACTTCAAAACAAGGAGTCACAGAGTTCATGAATGAAGTTGGATTGGTAGCCAAGCTACAACACCGCAATCTTGTGAGTGTTTTAGGAGGGTGCACTTATGGAAATGAAAGAATGTTAGTCTATGAATACATGCCTAATGGTAGTTTGAACCACTTCATTTTTGATCCTACACAAGGTAAAGTTTTACAGTGGAGAAAACGATATGACATTATTACGGGAGTTGCTCGAGGACTACTTTATCTTCATCAAGATTCAAAGCTAACAATTATTCACAGGGATCTGAAAACTAGTAATATTCTACTTGACAGTGAATTGAACCCCAAGATTTCTGATTTTGGTGTGTCACATATCTTGGAAGGAGATAGTTCAGCTGTAACAACGAATAAAATTGTCGGAACAATTGGTTATATGTCTCCTGAATATGCGGTAAACGGACTACTGTCGCTCAAGTCAGATGTATTTAGTTTTGGAGTTATAGTGTTAGAGATATTGAGTGGCATCAGAAATAATCACTTCAAGAATCAAGATCATCCCCATAATCTTTTGGGACAGGCATGGATATTATGGAAAGAGGGAAGAGCATTGGAATTCATGGATGCTAATCTAGACCTTACAAGTATCCCATCTGAATTACTAAGGTGCGTACAAGTTGGTCTTTTGTGTGTTCAAAAGTTCCCTGAAGACAGACCAGATATGTCTTCTGTGGTTTTTATGTTGGGCAATGAAAGTATTGCACTTGCACAACCAAAGAAGCCTGGTTTCTTTTCAGAAGAGATAGAGTTTCATGAGTATAGTGAGAAGGACACTTTTAGCAACAATACTATGACTATTACCCTATTGGAAGCACGAGATTAG 2412 0.3814 MLDKVSYAADTLTQKSSIIDGQELISAGQIFCLGFFSPGSSKKYYLGIWYKNITPQTVVWVANREKPLNNSSGNLTIGVDGNILLVDGVGNKIWYTNSSRSIQEPLAKLLDSGNLVLMDGENHDSNSYIWQSFDYPTDTMLPGMKLGWDKASGLNRYLTSWKSADDDPSYGSFTYNFDHKEFAELVIRQGKDITFRSGIWNGVRFNSDDWASFTGVTAFKPQLSVTKNEVVYWDEPGDRLSRFMMRDDGLLERYIWDSNIGKWTKMYEARKDLCDNYGACGINGVCNIDDVPVYCDCLKGFKPRSQDEWDSFNRSGGCIRKTPLNCTEADRFQKLSSVKLPMLLQFWTNSSMSLEECEVKCLKDCSCTAYANSAINEGPHGCLIWFGDLIDIRLFITEDSLQLDLYVRLAASEIESTASASKRRKLALIISVSLAVFVLCIIFYICMKYAKVRKRKTTVDLGQRNQNEEQASPLFDIDTILAATDSFSVENKIGQGGFGPVYKGILAQGQEIAVKRLSKTSKQGVTEFMNEVGLVAKLQHRNLVSVLGGCTYGNERMLVYEYMPNGSLNHFIFDPTQGKVLQWRKRYDIITGVARGLLYLHQDSKLTIIHRDLKTSNILLDSELNPKISDFGVSHILEGDSSAVTTNKIVGTIGYMSPEYAVNGLLSLKSDVFSFGVIVLEILSGIRNNHFKNQDHPHNLLGQAWILWKEGRALEFMDANLDLTSIPSELLRCVQVGLLCVQKFPEDRPDMSSVVFMLGNESIALAQPKKPGFFSEEIEFHEYSEKDTFSNNTMTITLLEARD 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00304 803 CDD STKc_IRAK 493 758 - -
Mepo6g00304 803 CDD B_lectin 20 136 IPR001480 -
Mepo6g00304 803 ProSiteProfiles Bulb-type lectin domain profile. 9 130 IPR001480 -
Mepo6g00304 803 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 451 562 - -
Mepo6g00304 803 Pfam Protein tyrosine and serine/threonine kinase 489 755 IPR001245 GO:0004672|GO:0006468
Mepo6g00304 803 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 563 766 - -
Mepo6g00304 803 Gene3D Transferase(Phosphotransferase) domain 1 563 769 - -
Mepo6g00304 803 ProSitePatterns Serine/Threonine protein kinases active-site signature. 608 620 IPR008271 GO:0004672|GO:0006468
Mepo6g00304 803 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 9 749 - -
Mepo6g00304 803 ProSiteProfiles Protein kinase domain profile. 487 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00304 803 Pfam S-locus glycoprotein domain 195 304 IPR000858 GO:0048544
Mepo6g00304 803 CDD PAN_AP_plant 322 410 - -
Mepo6g00304 803 SMART serkin_6 487 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00304 803 SMART blect_4 15 136 IPR001480 -
Mepo6g00304 803 ProSiteProfiles PAN/Apple domain profile. 326 410 IPR003609 -
Mepo6g00304 803 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 4 133 - -
Mepo6g00304 803 SUPERFAMILY Protein kinase-like (PK-like) 471 758 IPR011009 -
Mepo6g00304 803 Pfam PAN-like domain 326 392 IPR003609 -
Mepo6g00304 803 SUPERFAMILY alpha-D-mannose-specific plant lectins 58 166 IPR036426 -
Mepo6g00304 803 PIRSF SRK 1 802 IPR024171 GO:0004674
Mepo6g00304 803 Gene3D - 3 133 IPR036426 -
Mepo6g00304 803 SMART ntp_6 327 409 IPR003609 -
Mepo6g00304 803 Pfam D-mannose binding lectin 57 162 IPR001480 -
Mepo6g00304 803 Gene3D Phosphorylase Kinase; domain 1 447 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00304 Mepo-Chr6 3094038 3097587 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00304 428 773 Receptor kinase-like Gene Family AT4G23230 49.721 1.20e-114 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo6g00304 PK_Tyr_Ser-Thr 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00304 - - gmx:102669607 1301.58