Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00303 ATGAGGTTCAATATCATATGTGGAATAGCCAAAGGGTTACTTTATCTCCATCATGACTCAAGATTTAGAATTATCCATAGGGATCTCAAGGCAAACAATGTTCTACTTGATAAAGAAATGAATCCAAAGATATCAGATTTTGGGATTGCTAGAATATTTGACAATGATCAAACACATTCTAGTACAATGAGAATTGTTGGAACATATGGATATATGTCTCCTGAATATGCAATGGGTGGATATTTTTCGGCAAAATCTGATGTTTTCAGTTTCGGAGTTCTCGTGCTAGAAATCATAAATGGAATGAAGAATAGAGGATTTCATCAATCAGATGACCTAAATCTTCTTGGACATGCATGGAGGCTATGGAATGAAGGGAAAGCAATGGAACTAATAGATTCATCATATGCAGATTCATATTCAGAATCTGAAGTTATAAGATGCATAAATGTTAGCCTAATATGTGTACAAGAAAAAATAGAAGACAGACCTATAATGCCATCAGTGGTGATGATGTTGAATAGCGAAACATCGTCATTGCCACAACCTAAGCACCCTGGTTCTGTCCTTGGTAGGAATCCAGGTGAATCTGATTCATCTTCAGCTAATCAAGATGACACAATAAACGAAGTCACAGTTACAATAATAAATGGCAGGTAG 660 0.3576 MRFNIICGIAKGLLYLHHDSRFRIIHRDLKANNVLLDKEMNPKISDFGIARIFDNDQTHSSTMRIVGTYGYMSPEYAMGGYFSAKSDVFSFGVLVLEIINGMKNRGFHQSDDLNLLGHAWRLWNEGKAMELIDSSYADSYSESEVIRCINVSLICVQEKIEDRPIMPSVVMMLNSETSSLPQPKHPGSVLGRNPGESDSSSANQDDTINEVTVTIINGR 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00303 219 ProSiteProfiles Protein kinase domain profile. 1 219 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00303 219 MobiDBLite consensus disorder prediction 193 210 - -
Mepo6g00303 219 Gene3D Transferase(Phosphotransferase) domain 1 1 184 - -
Mepo6g00303 219 MobiDBLite consensus disorder prediction 177 210 - -
Mepo6g00303 219 ProSitePatterns Serine/Threonine protein kinases active-site signature. 24 36 IPR008271 GO:0004672|GO:0006468
Mepo6g00303 219 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 217 - -
Mepo6g00303 219 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1 181 - -
Mepo6g00303 219 Pfam Protein tyrosine and serine/threonine kinase 3 172 IPR001245 GO:0004672|GO:0006468
Mepo6g00303 219 SMART serkin_6 3 165 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00303 219 SUPERFAMILY Protein kinase-like (PK-like) 2 186 IPR011009 -
Mepo6g00303 219 Pfam Domain of unknown function (DUF3403) 175 219 IPR021820 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00303 Mepo-Chr6 3088147 3089154 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00303 2 214 Receptor kinase-like Gene Family AT4G11530 55.656 7.26e-83 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo6g00303 PK_Tyr_Ser-Thr 9.9e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00303 - - aip:107621503 328.176