Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00302 ATGTTGGTCTATGAATACATGTCAAATAAAAGCTTGGACTCCTTATTATTTGATGAAACCAAGCGTTCCACGCTTAGTTGGCAAAAGAGGCTAGACATTATTAACGGCATTGCTAGGGGACTTGTCTATCTTCATAGAGATTCAAGACTAAGAATAGTTCATAGAGATCTGAAAGCAAGCAATGTTCTTTTAGATGGCGAATTGAATCCAAAAATTTCTGACTTTGGAATGGCAAGAATTTTTGGTGGAGATCAAACTGAAGAAAAGACCAAAAGGGTAGTTGGAACATATGGATACATGCCTCCGGAGTACGCAATGGATGGACATTTCTCTTTCAAATCTGATGTTTATAGCTTTGGAGTTTTACTTTTAGAGCTGTTGAGTGGCAAGAAAAACAAAGGATTTTTTCACCCTGATCACAAGTTGAATCTCCTAGGCCATGCATGGAAGCTTTGGAATGGAGGTAAAGCCATTGAGTTGATGGATCCATTACTTGAGGATCAAGTTCCTACCCTTGAATCCATTTTAAAGTGTATTCAAGTTGGTCTTTTATGTGTTCAACAACATCCAGAAGAAAGACCAACAATGTCATCAGTGGTATTAATGTTGGATGGTGAAAGTGTGTTGCTCCCAAAACCTAGAAGGCCAGGTTTGTATTCAGAGAGGTGTTTCTTAGAGACAGATTCATCATCACGTGGGATGCTCAATTCTGGTTCCAATGACATAACTGTAACCACTACTGTAGTAGAGGGTCGTTAA 759 0.3887 MLVYEYMSNKSLDSLLFDETKRSTLSWQKRLDIINGIARGLVYLHRDSRLRIVHRDLKASNVLLDGELNPKISDFGMARIFGGDQTEEKTKRVVGTYGYMPPEYAMDGHFSFKSDVYSFGVLLLELLSGKKNKGFFHPDHKLNLLGHAWKLWNGGKAIELMDPLLEDQVPTLESILKCIQVGLLCVQQHPEERPTMSSVVLMLDGESVLLPKPRRPGLYSERCFLETDSSSRGMLNSGSNDITVTTTVVEGR 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00302 252 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 233 - -
Mepo6g00302 252 SUPERFAMILY Protein kinase-like (PK-like) 1 203 IPR011009 -
Mepo6g00302 252 ProSiteProfiles Protein kinase domain profile. 1 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00302 252 PIRSF ILK 1 214 - -
Mepo6g00302 252 Gene3D Transferase(Phosphotransferase) domain 1 7 208 - -
Mepo6g00302 252 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 7 211 - -
Mepo6g00302 252 Pfam Protein tyrosine and serine/threonine kinase 1 201 IPR001245 GO:0004672|GO:0006468
Mepo6g00302 252 ProSitePatterns Serine/Threonine protein kinases active-site signature. 52 64 IPR008271 GO:0004672|GO:0006468
Mepo6g00302 252 SMART serkin_6 2 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00302 Mepo-Chr6 3083180 3084827 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00302 1 219 Receptor kinase-like Gene Family AT4G23140 59.111 1.20e-95 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo6g00302 PK_Tyr_Ser-Thr 1.2e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00302 - - mtr:11421613 489.189