Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00299 ATGGCAGAGGAGTTTCAAGCTGGAATTTGTGGTGAAACATGGTGGAATATTAATAATTCAACAAGAAGTGTATTCCCTCTTATGATGAACTCATCATCAACATGTTCTGTCGCAGCTAATGATGTAGGAAACTATAGTACTTGGCAAAATGACTTTTTGGGTTTGAAGGAAACAATAAGAACTTGTTCTGATATTGAAGTTAATAACTTTGATGTTTCTGATTGTTCTCTAAGTTTTCTTGATACTCAGAAGCCACAACATAGTGAATCATCAGCTAATGGAACTGGTAGCATGTTGATTGATTCCACCTTACAAATTATGGGTTTTGATCTCTTATCTCCAACTTCATCTAATTGGAATCAGTCCCTATTTAATGATTCACAAATTCAAAAGGAGTGGAGCACAAAGAATTTCTCATCTACAAGTGGAAGCCAAGTTTCAACTTTCATCAAGCCAATGGATCAAGAATTTTCCTTAGAACAACAAAATCTGAATTCTGTAACAAGCAATGGTTTATCATGTGGATATCCAATTGGATCAGTTAATAATTCCTATGGTTACCCTTCAAGTTTGATACAAAGTTTATTTGATCCTGAACCTCAACCACAACCACAAAACTCACTTTTTACCAACCCTTCTATGTCCTATTCATCCTCCAATGAACTTTCACCAACATGGTCTAATGTTACTTCACTTATGAAACCTTCAATGCCAAAACAACAGCTTAGTGGATTGCTCTTTTCAAATAATACTCCTTTCTGGAATGCTTCAGCTGAGGCCCTTAATGACATCAGAGCTGGAGTTTTTGCTTCATCACAACCACAACATCAATCTCCTAATTTTGAAGACAACAAATTCAATTCCTCAAATACTCTATTAAACAAGCTGAAGAGAGAAAAATCTCCAGATCCTAAAAATTCATCAGAAGCTGCAGCTAAGAGGCCAAGAATTGAGACTCCATCTCCATTACCAACTTTTAAGGTCCGGAAAGAGAAGCTAGGGGACCGGATCACAGCTCTTCAGCAATTGGTTTCACCTTTCGGAAAGACGGACACAGCATCTGTTCTTCATGAAGCCATTGAGTACATCAAGTTCCTTCATGATCAAGTCAATGTTTTGAGCACTCCATATATGAAAAATGGATCTCCCATTCAACACCAACAGGATTGTGATAATGTGAATGAGTCCGAAGGGAAAAAACAAGATTTAAGAAGCCAAGGACTTTGTTTGGTGCCGATTTCAAGCACATTTCCGATGACCAACGAGACTCCTGTTGACTTTTGGACGCCTACATTTGGAGGTCCACTGTTCGGCCGATAG 1320 0.3803 MAEEFQAGICGETWWNINNSTRSVFPLMMNSSSTCSVAANDVGNYSTWQNDFLGLKETIRTCSDIEVNNFDVSDCSLSFLDTQKPQHSESSANGTGSMLIDSTLQIMGFDLLSPTSSNWNQSLFNDSQIQKEWSTKNFSSTSGSQVSTFIKPMDQEFSLEQQNLNSVTSNGLSCGYPIGSVNNSYGYPSSLIQSLFDPEPQPQPQNSLFTNPSMSYSSSNELSPTWSNVTSLMKPSMPKQQLSGLLFSNNTPFWNASAEALNDIRAGVFASSQPQHQSPNFEDNKFNSSNTLLNKLKREKSPDPKNSSEAAAKRPRIETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVNVLSTPYMKNGSPIQHQQDCDNVNESEGKKQDLRSQGLCLVPISSTFPMTNETPVDFWTPTFGGPLFGR 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00299 439 MobiDBLite consensus disorder prediction 296 312 - -
Mepo6g00299 439 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 327 384 IPR036638 GO:0046983
Mepo6g00299 439 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 317 366 IPR011598 GO:0046983
Mepo6g00299 439 CDD bHLH_AtbHLH_like 323 374 IPR045239 -
Mepo6g00299 439 Gene3D - 327 389 IPR036638 GO:0046983
Mepo6g00299 439 MobiDBLite consensus disorder prediction 295 326 - -
Mepo6g00299 439 FunFam Transcription factor bHLH123 family 327 389 - -
Mepo6g00299 439 MobiDBLite consensus disorder prediction 195 216 - -
Mepo6g00299 439 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 160 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00299 Mepo-Chr6 3052217 3055496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00299 1 437 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 42.826 1.79e-73 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00299 - - gmx:100794682 583.563