Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00246 ATGAGTTCTGAAGGTGTTGGTGAAGATTGCCTTGCATGGGCAGCAAGAGATGCATCTGGTGTTCTGTCGCCTTACAGATTCAATCGAAGGGCTCTTGGGAGTGAAGATATTTATGTTAAAATTACACACTGTGGCGTTTGTTATGCTGATGTAATTATGGCAAGGAATAAACATGGGGATTCAAAGTATCCTGTTGTGCCGGGACACGAAATTGCTGGGGTTGTGGCAAAGGTTGGTCCTAATGTCCAGCGTTTCAAGGTTGGTGACCATGTTGGAGTGGGGACTTACATCAACTCATGCAGGGAATGTGAGTATTGTAATGATAGACTAGGAATTCATTGTGCCAAGGGATCAGTTTACACCTTTAATTGTGTTGATTATGATGGTACAATTACAAAAGGAGGATACTCGACTTCGATTGTAGTAAATGAAAGGTATTGCTTCTTGATACCTAAAAGCTATCCTTTAGCTTCAGCAGGTCCTTTGATTTGTGCTGGAATCACTGTTTATTCTCCCATGATGCGACATAATATGAATCAACCTGGTAAGTCTCTTGGAGTGGTTGGTCTTGGTGGCCTCGGTCATATGGCAGTAAAATTTGGGAAGGCATTTGGTTTGCGTGTAACGGTTTTCAGCACTAGTATGTCAAAGAAAGAGGAGGCGCTGAGCTTTCTTGGTGCAGACCAATTTGTTGTTTCATCTAATCAAGAAGAGATGAGGTTAACTAAAACATTGGATTTTATAATTGACACGGCATCGGGTGATCACCCGTTTGATCCTTACATGTCACTTCTGAAGATATCTGGTGTTCTGGTCTTAGTTGGGTTCCCAAGTGAAGTCAAATTCAGCCCTGCAAGCCTTAATTTAGGATCAAGAACTGTTGCCGGAAGTGTTGCAGGTGGTACAAAAGAAATACAGGAGATGGTTGACTTCTGTGCTGCAAACGGGATTCACCCAGATATAGAACTGATTCCAATTGGGTACTCAAATAAAGCTCTTGAGAGGGTCGTCAGTAAGGACGTGGAATATCGGTTTGTGATAGACATTGAAAACTCCCTCAAGTAG 1065 0.4235 MSSEGVGEDCLAWAARDASGVLSPYRFNRRALGSEDIYVKITHCGVCYADVIMARNKHGDSKYPVVPGHEIAGVVAKVGPNVQRFKVGDHVGVGTYINSCRECEYCNDRLGIHCAKGSVYTFNCVDYDGTITKGGYSTSIVVNERYCFLIPKSYPLASAGPLICAGITVYSPMMRHNMNQPGKSLGVVGLGGLGHMAVKFGKAFGLRVTVFSTSMSKKEEALSFLGADQFVVSSNQEEMRLTKTLDFIIDTASGDHPFDPYMSLLKISGVLVLVGFPSEVKFSPASLNLGSRTVAGSVAGGTKEIQEMVDFCAANGIHPDIELIPIGYSNKALERVVSKDVEYRFVIDIENSLK 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00246 354 Gene3D - 13 349 - -
Mepo6g00246 354 SMART PKS_ER_names_mod 20 347 IPR020843 GO:0016491
Mepo6g00246 354 Pfam Zinc-binding dehydrogenase 192 313 IPR013149 -
Mepo6g00246 354 PANTHER ALDEHYDE REDUCTASE 9 352 IPR047109 GO:0016616
Mepo6g00246 354 CDD CAD1 12 348 IPR047109 GO:0016616
Mepo6g00246 354 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 185 212 IPR029752 -
Mepo6g00246 354 Pfam Alcohol dehydrogenase GroES-like domain 35 148 IPR013154 -
Mepo6g00246 354 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Mepo6g00246 354 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 317 IPR036291 -
Mepo6g00246 354 Gene3D - 165 319 - -
Mepo6g00246 354 FunFam Cinnamyl alcohol dehydrogenase 165 319 - -
Mepo6g00246 354 SUPERFAMILY GroES-like 14 183 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00246 Mepo-Chr6 2345886 2348605 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00246 2 354 Monolignol Biosynthesis Gene Families AT1G72680 72.316 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00246 K00083 - gmx:100807617 595.119