Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00224 ATGGATGGAAGCAACAGAGGTGAAGCTGAACGATGGCTTTACACAGCCAACAAACTCCTCAGCGCGCGTGACTTACACGGCGCCCGTTCCTTCGCCATTCGGGCACAAGAATCCGACCCGAGATTCGAAGCCACTGAACTTCTTCTCGCGGTTATCGACACTCTCTTAGCCGGTGAAGCTAGAATCAAAGAACAAATTGATTATTACGCCATTCTTCAAATCCTTCGTTATACTCAGAATATTGAGTATATCGCCGATCAATATCGCCGTCTTGCAATCCTCCTTGACCCGAACCGTAACCCGTTTGCTTATGCTGCTCATGCTTTCTCTCTTGTTCATGATGCTTGGTCCATTTTCTCAAATCCACATAAGAAAGCTTTGTATGATGAACAGCTTCATTTTCTTACTCAACCACCACCACCACCGCCACAACAACAACCACAACCGCAACCTATTCAATTTCCTTTACAACAACAACAACTACTACAACCGCAACCACAACATTTTCAACCTCCTCCTTCAGTTCAAGTCAACGACAATTACAATCATCAACAACAGAGAAAAAACCAAAACCCTAGGTCAACCAATGAACCTGTTAGGGTGATTGATGAGGAACAAAACAATGGGCCGAGTCATGGCAATGCTGATGAGTCTACTGGGCCTAGGCCAAGGCCGGAGTCTGCTGGGGCTAAGCCCGTTGGAACTGACGCTCAAACTTTCTGGACGGCGTGTCCTTACTGTTATGGGATGTTTGAGTATCCTAAGGTTTATGTTGATTGTACACTCCGGTGTCAGAATTGTAAGAGGGGTTTTCATGCAGTGGTGGTACGGGCACCACCGGAGGTGACTGGAGATGACGGTGATGAGGGAGAGGTTGGTGGTTTTTTCTGTAGCTTTGGGCATTTTCCTTTAGGGTTTAGTGGGAATTTTAAGGATATTAATGGGTCTTCTTCGGAATGGAATCCTATGTCTGCTTTGTTTCATTGCCCTATGAATGGTGCGAAGAAGAATGCTCGGAAGGGGCCTGTTAGTTATTATGATCATGATACATGTGCAGCGTTCGCGGAGCTTTCTGATGATACTGATGATGATGATAGCAGTGACGGTGATTGGCGGGGTACCAAAGGGAGTAGGATGGGTAGGAGGAGGAGGAGGAGGAGAAGAAGAGGGGCTTTTGGTGGTGGTACTGATGTTGAAAGGAGACCGATTGAGAGGCCTAGGAGGGGGGTTCAACAAAATGGTAATGCTGAGAATGACAATGGTGGTGGTGGTGACAATGTGGTTGATGGTGAGGCTGTTGATGCTACTTCCGCGCCTGCAATGGTGTCAAATGTTGAGGCTGGTAAGAAGGCTGTGGTGGGTGGTTCGAGGAGGAGGGGTGCTGGAAATTTGGGTAAGTTGGATTTGAACGTGGAGTTCAGCAATGAGGTGGAAGAAGCTTCTGCTAGTGGAGTGAGACAGGGGAACGTGAACGGGACAGGGAATGCCGAGGATAATATTGAAGGGATTGGGTTTTTTGAAGGGCTTGATGAGTTCCTTAGTAGCTTACCAATTCTTAATGTTGTTGCAGATGACAAGGTTAAGTGTCATTAG 1593 0.4702 MDGSNRGEAERWLYTANKLLSARDLHGARSFAIRAQESDPRFEATELLLAVIDTLLAGEARIKEQIDYYAILQILRYTQNIEYIADQYRRLAILLDPNRNPFAYAAHAFSLVHDAWSIFSNPHKKALYDEQLHFLTQPPPPPPQQQPQPQPIQFPLQQQQLLQPQPQHFQPPPSVQVNDNYNHQQQRKNQNPRSTNEPVRVIDEEQNNGPSHGNADESTGPRPRPESAGAKPVGTDAQTFWTACPYCYGMFEYPKVYVDCTLRCQNCKRGFHAVVVRAPPEVTGDDGDEGEVGGFFCSFGHFPLGFSGNFKDINGSSSEWNPMSALFHCPMNGAKKNARKGPVSYYDHDTCAAFAELSDDTDDDDSSDGDWRGTKGSRMGRRRRRRRRRGAFGGGTDVERRPIERPRRGVQQNGNAENDNGGGGDNVVDGEAVDATSAPAMVSNVEAGKKAVVGGSRRRGAGNLGKLDLNVEFSNEVEEASASGVRQGNVNGTGNAEDNIEGIGFFEGLDEFLSSLPILNVVADDKVKCH 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00224 530 MobiDBLite consensus disorder prediction 172 197 - -
Mepo6g00224 530 MobiDBLite consensus disorder prediction 391 407 - -
Mepo6g00224 530 Pfam DnaJ domain 67 129 IPR001623 -
Mepo6g00224 530 MobiDBLite consensus disorder prediction 358 430 - -
Mepo6g00224 530 SUPERFAMILY Chaperone J-domain 62 134 IPR036869 -
Mepo6g00224 530 SMART dnaj_3 66 124 IPR001623 -
Mepo6g00224 530 Coils Coil 520 530 - -
Mepo6g00224 530 MobiDBLite consensus disorder prediction 165 233 - -
Mepo6g00224 530 Gene3D DnaJ domain 64 210 IPR036869 -
Mepo6g00224 530 CDD DnaJ 67 121 IPR001623 -
Mepo6g00224 530 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 420 - -
Mepo6g00224 530 ProSiteProfiles dnaJ domain profile. 67 132 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00224 Mepo-Chr6 2179698 2181704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00224 8 528 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 37.828 2.24e-95 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00224 - - mtr:11433870 857.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g03478 2 44398004 44400039 Mepo6g00224 6 2179698 2181704 PCT