Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00208 ATGTTGGAAGCTGGGGCCCTTGTCTTGGCAGATGGAGGATTGTGTTGCATAGATGAATTTGATAGTATGAGGGAACATGACAGAGCAACAATACACGAAGCCATGGAGCAGCAGACAATAAGTGTTGCCAAGGCTGGTCTTGTAACAACCCTCAGCACTAAAACAACAGTATTTGGCGCCACAAATCCTAAGGGAAATTATGATCCAGATCAACCTCTGTCTGTCAATACAACCCTCTCCGGTCCTTTGTTAAGTAGGTTTGATATAGTTCTGGTGCTCTTGGATACAAAGAATCCTGACTGGGATGCAGTAGTTTCATCTCATATTCTTTCTGAGGCAGAACCAGATAGAACCTCCAATGATGAAGATCTGGCAAATAACTGGCCTCTTTCTACGCTCAAGAGGTATATACACTACGTGAAAGAAAATTTCAGACCAGTCCTCACGAGAGAGGCCGAAACAGTTATATCCAGCTATTATCAACTTCAAAGAAAATCTGCGACTCATAATGCAGCTAGGACAACTGTCCGCATGCTTGAAAGTTTGATTCGACTAGCTCAAGCTCATGCAAGGCTGATGTTCAGAAATGAGGTGACTCGGCTAGATGCCATCACAGCTGTTTTGTGCATAGAGTCCTCCATGACCACCTCAGCTATTGTGGATTGCATTGGGAATGCTCTGCATTCCAATTTCACTGACAACCCTGACCAGGAATATGCAAAGCAAGAAAAGTTGATCCTTCAAAAGTTGGAATGCAAAGACAACTTTTCTGATGTGAATAGGATGGAAGACTGA 795 0.434 MLEAGALVLADGGLCCIDEFDSMREHDRATIHEAMEQQTISVAKAGLVTTLSTKTTVFGATNPKGNYDPDQPLSVNTTLSGPLLSRFDIVLVLLDTKNPDWDAVVSSHILSEAEPDRTSNDEDLANNWPLSTLKRYIHYVKENFRPVLTREAETVISSYYQLQRKSATHNAARTTVRMLESLIRLAQAHARLMFRNEVTRLDAITAVLCIESSMTTSAIVDCIGNALHSNFTDNPDQEYAKQEKLILQKLECKDNFSDVNRMED 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00208 264 SMART mcm 1 215 IPR031327 GO:0003677|GO:0005524|GO:0032508
Mepo6g00208 264 PRINTS Mini-chromosome maintenance (MCM) protein family signature 83 91 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mepo6g00208 264 PRINTS Mini-chromosome maintenance (MCM) protein family signature 5 19 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mepo6g00208 264 PRINTS Mini-chromosome maintenance (MCM) protein family signature 33 46 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mepo6g00208 264 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 1 249 IPR031327 GO:0003677|GO:0005524|GO:0032508
Mepo6g00208 264 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 223 IPR027417 -
Mepo6g00208 264 Pfam MCM AAA-lid domain 132 213 IPR041562 -
Mepo6g00208 264 ProSiteProfiles MCM family domain profile. 1 109 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mepo6g00208 264 Pfam MCM P-loop domain 1 111 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mepo6g00208 264 Gene3D - 1 219 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00208 Mepo-Chr6 2044478 2047187 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00208 1 238 Core DNA Replication Machinery Family AT2G14050 83.193 3.69e-144 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00208 K10738 - gmx:100776255 473.011