Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00199 ATGAAGAAGGAAGAAGAATCAACGGTTCAGATGGAATGGTTAACTTCAATTGATTCAACAACTCTCACACATTCAGAGCTTCAAGCACTTTCTCTCTCTTCTCTCTCTTCCTTCGACCTTAAATCTACACGCGAAATCGTCACTCCTAAAATCGATCCATCTACTTTCAACCACAGCGCTGGGTCCCACCGCACCTACTCCCGTCCTCACCGTCGATGTCGCGTCGCACCGCCGCTTCTTCCTACTCCAACTCTCCCCTCCGACCACCGCATCATCATCGATTACCTCAAACAGTTCATCAGAGAAGATCCGAAGTTCGATACGGTCGAACTTCGGAATCCTTCAATTCCGGAGGTGAAGGAATTTCCATTGCCATTGCCTGGTGCTGAAGTGAGGAAGAGGAAGAGAGGGAGGAAACCGAAAGTGAAAGCGCATTTAGAGGAAGAGATTGTGAATAAAAACGGTGTTGTAATTGATTTTGCGGCGTTATCGGAGGTGGAGCATCCGTTTGCTGCGGAGATTGCGAGAAGAACGGAGGGTTTAAGGGAGGAAGAAGAGTTGTTAGGGTTTTTGAGTGATTTGGTTGGGCAGTGGGGAAGTAGAAGGAGGAAGAGGAGGATTGTTGATGCTGCTGATTTTGGGGATGTGTTGCCTTTGGGTTGGAAGCTTCTTCTTAGTTTGAAGAGGAAAGATGGTCGTGCTTGGATTTATTGCCGCAGATATATAAGTCCTAATGGACAACAGTTTCTGTCTTGCAAAGAAGTTTCTTCCTATCTGCAGTCTCTTTTTGGTCACGCTGATGCACAGTTACAAATCACTCAAAGAAGTGAAAATATACTTCCGGAACAGAGAGTGACTACTGAAAATGTAAGTAACCCTGCTGCTGCTTCTGTTGCCCGCGAGGTGCAGGACCAACGGCAGATTGTTGCCACTAACTCAGATGCGTCTGGTTTGTCCGTCTCTAATGAACGATTCAAGGAAATTGCCTTGTTGGAGATGGATAACCTTGCAGATGTGCAAATACGTGATCTGTTTGAATGTCATAAGTGCAGCATGACCTTTGATGAGAAGGATGCGTATTTGCAGCACCTGTTGTCTATTCATCAGAAGACGACGAGGCGGTATCGACTTGGTTCATCTGTTTCAGATGGAGTTATAATTAAAGATGGAAAGTTTGAGTGCCAGTTCTGTCATAAAGTGTTTTTGGAAAAGCGTCGCTACAATAGTCATGTTGGGATTCATGTTAGGAATTATTTGAGGAGAGCTGAAGATTTGCCGGGTCAGCCTAACATCCTGGGAGCAGAAGAGTCTCTAGTCACGGATGAGACACCTTCAAAGATCACGAAGATGGATGCCCTCATCGAAATTGCTCAAAACTCTATTATAGAGGATTCTGTCATGGAACCATATTGTTCCTCTACACTAAATACGATACCTGTTTCAGAAATTGCGGTTGGCGACTTAGATGTAAATATAAATGCTGAGTCTCCATTCGGTGAACAGAAAATGGAAAAGAGCTTGACTGGCACAAATATAGTTAGCGATCTAGATCAGCAAGGTAGTCCTCGTTTACCCATGGATGGAACAATAGAGGAAATTGATGCCAATAACCGAGTTATTGATGCAAAGATGGTTAGTTTTCTAGATAACACGGGTTTGTTATCTGTAAATAAGAAAAATGTTGATGCACCTGATACTTCTGAAGGTAAAGGTGGTGCGGCGCTGACTGTTGAGGGGTTTGATCATTCTGGGAGTGAACTGCAAGGAGCTTCTCAAAGTCCCTTGCATCATTCATCTGGGAATCACATGAAACCTGGATCCAAGACAAGTGAAAATTCTGGTTGCACTAATACTAAGGAGGATCTTAAACTTGATGAAGACAGTAGCAATAAGAGTGACTTGAAAATTGGTTTAGATAGCTGCAAAGATGTACCTGGAGTTTCTAATGTTCATGTGACAGCAATGCCAACTTCTAACGAAAATGTGGTCCAATCTAAGGTTTCTAACCCCTCGGTATCCCCAGAGCAATCTTTGGATTCTTTTTCTGCATTCAGCTCCGACAAGGGGTTCCAGGAATTGAGGTTAGAAGATATTGGTTCTCTCGAGTATGATTTTGCAAGTGTTCAAGGTTCTCTTGATGTGTCAACTGAATTGGCAAATGACATAGTGGTGCAAGGGACATGTGCATCCTCAGCTCAGTCTGCATCACAAGAAGTTATGTTAAATATGGATTACAAAAATCAGCTCACAACCACGTGTGTATGGTGTGGAATAGAGTTTAACCATGATGCTGTTAATTCTGAAATACAATCAGATTCCGTTGGATTCATGTGTCCAGTTTGCAAGGCAAAAATCTCTGGTCAAATCAATGTGTTGGACAGTGGATCACCAAATGCTGGCCATCTTTAG 2409 0.4334 MKKEEESTVQMEWLTSIDSTTLTHSELQALSLSSLSSFDLKSTREIVTPKIDPSTFNHSAGSHRTYSRPHRRCRVAPPLLPTPTLPSDHRIIIDYLKQFIREDPKFDTVELRNPSIPEVKEFPLPLPGAEVRKRKRGRKPKVKAHLEEEIVNKNGVVIDFAALSEVEHPFAAEIARRTEGLREEEELLGFLSDLVGQWGSRRRKRRIVDAADFGDVLPLGWKLLLSLKRKDGRAWIYCRRYISPNGQQFLSCKEVSSYLQSLFGHADAQLQITQRSENILPEQRVTTENVSNPAAASVAREVQDQRQIVATNSDASGLSVSNERFKEIALLEMDNLADVQIRDLFECHKCSMTFDEKDAYLQHLLSIHQKTTRRYRLGSSVSDGVIIKDGKFECQFCHKVFLEKRRYNSHVGIHVRNYLRRAEDLPGQPNILGAEESLVTDETPSKITKMDALIEIAQNSIIEDSVMEPYCSSTLNTIPVSEIAVGDLDVNINAESPFGEQKMEKSLTGTNIVSDLDQQGSPRLPMDGTIEEIDANNRVIDAKMVSFLDNTGLLSVNKKNVDAPDTSEGKGGAALTVEGFDHSGSELQGASQSPLHHSSGNHMKPGSKTSENSGCTNTKEDLKLDEDSSNKSDLKIGLDSCKDVPGVSNVHVTAMPTSNENVVQSKVSNPSVSPEQSLDSFSAFSSDKGFQELRLEDIGSLEYDFASVQGSLDVSTELANDIVVQGTCASSAQSASQEVMLNMDYKNQLTTTCVWCGIEFNHDAVNSEIQSDSVGFMCPVCKAKISGQINVLDSGSPNAGHL 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00199 802 Gene3D Classic Zinc Finger 324 419 - -
Mepo6g00199 802 Gene3D - 197 308 - -
Mepo6g00199 802 Pfam Methyl-CpG binding domain 216 261 IPR001739 GO:0003677
Mepo6g00199 802 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 2 616 IPR037472 -
Mepo6g00199 802 SMART c2h2final6 345 368 IPR013087 -
Mepo6g00199 802 SMART c2h2final6 392 414 IPR013087 -
Mepo6g00199 802 MobiDBLite consensus disorder prediction 585 617 - -
Mepo6g00199 802 ProSiteProfiles Zinc finger C2H2 type domain profile. 345 373 IPR013087 -
Mepo6g00199 802 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 207 279 IPR001739 GO:0003677
Mepo6g00199 802 MobiDBLite consensus disorder prediction 51 70 - -
Mepo6g00199 802 MobiDBLite consensus disorder prediction 557 630 - -
Mepo6g00199 802 ProSitePatterns Zinc finger C2H2 type domain signature. 394 414 IPR013087 -
Mepo6g00199 802 ProSitePatterns Zinc finger C2H2 type domain signature. 347 368 IPR013087 -
Mepo6g00199 802 SUPERFAMILY DNA-binding domain 213 262 IPR016177 GO:0003677
Mepo6g00199 802 ProSiteProfiles Zinc finger C2H2 type domain profile. 392 419 IPR013087 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo6g00199 MBD 8.3e-05 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00199 - - lang:109329666 886.715