Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00190 ATGGATAGTCTCTGTTGCTTCAACTCTTCCCGAAAGGGTGTTGGAGGACGTTCTTTATGCGGCTCTGGCAAAGGCAAGAGCCTTCAATGCCCTCTTAAGTATGGCTTTTGCTTAGTTGAAGGGACACAAGACCACACAATGGAGGACTTTCACGTTGCAAAAATTGTCCAGTTCAACGGCCGAGAGTTAGGACTTTTTGCTATATTTGATGGACACTCGGGTGATACCGTGCCTGCCTATTTACAAAAACATCTCTTTTCTAATATCTTGAAGGAAGAGGATTTCTGGACTGATCCAAACAGTTCGATCATCGAAGCTTATGAGGCAACTGATCAGGCTATTCTTTCTCACAGTCCTGATTTGGGACGAGGAGGATCGACTGCAGTGACTGCCATTCTAATAAATAATCAGAAATTATGGATAGCAAATGTTGGAGATTCACGGGCAGTTCTGTCGAGGAAAGGTGTGGCTATACAGATGAGTATTGATCACGAGCCAAATACTGAAAGACGCATCATCGAGAATAAAGGCGGTTTTGTCTCAAACCTTCCAGGAGATGTTGCAAGAGTGAATGGACAGCTTGCAGTTGCTCGAGCATTCGGAGACAGAAACCTGAAGTCACACTTGCGATCTGATCCAGACGTAAAACCCGACGATATCGACCAAGACACTGAGCTCTTGATACTTGCTAGTGATGGTCTATGGAAGGTAATGGCAAACCAAGAGGCAGTTGATATTGCATTGAAGATAAAAGATCCACAAAAGGCAGCTAAACAACTAATTGCAGAGGCATTGAAAAGAGAGAGCAGGGATGACATTTCCTGCATTGTAGTTCGTTTCAAGTGA 846 0.4397 MDSLCCFNSSRKGVGGRSLCGSGKGKSLQCPLKYGFCLVEGTQDHTMEDFHVAKIVQFNGRELGLFAIFDGHSGDTVPAYLQKHLFSNILKEEDFWTDPNSSIIEAYEATDQAILSHSPDLGRGGSTAVTAILINNQKLWIANVGDSRAVLSRKGVAIQMSIDHEPNTERRIIENKGGFVSNLPGDVARVNGQLAVARAFGDRNLKSHLRSDPDVKPDDIDQDTELLILASDGLWKVMANQEAVDIALKIKDPQKAAKQLIAEALKRESRDDISCIVVRFK 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00190 281 CDD PP2Cc 45 280 IPR001932 -
Mepo6g00190 281 ProSiteProfiles PPM-type phosphatase domain profile. 33 280 IPR001932 -
Mepo6g00190 281 PANTHER PROTEIN PHOSPHATASE 29 280 IPR015655 GO:0004722|GO:0006470
Mepo6g00190 281 Gene3D - 22 281 IPR036457 -
Mepo6g00190 281 SMART PP2C_4 21 278 IPR001932 -
Mepo6g00190 281 Pfam Protein phosphatase 2C 44 273 IPR001932 -
Mepo6g00190 281 SUPERFAMILY PP2C-like 28 281 IPR036457 -
Mepo6g00190 281 SMART PP2C_SIG_2 44 280 IPR001932 -
Mepo6g00190 281 FunFam Probable protein phosphatase 2C 39 25 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00190 Mepo-Chr6 1887780 1891543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00190 1 281 PP2C-type Phosphatase Gene Family AT1G22280 66.202 1.33e-135 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00190 K17506 - gmx:100787659 447.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g03507 2 44622038 44628227 Mepo6g00190 6 1887780 1891543 PCT