Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00189 ATGGCTGAACCTCCTTCTTATGGTTTAGGTCCTCGATTAGACATTCAGCAATTACAATTTGAAGCCCAACATCGGTGGTTGCGACCGGCGGAAATTTGTGAAATTCTTCGTAATTATCGGATGTTTCATATCACACCAGAACCTCATACAAGGCCGCCGAGTGGTTCACTTTTTCTTTTTGACCGGAAGGTTTTGAGATACTTTAGAAAGGACGGGCATAATTGGAGAAAGAAAAAAGATGGAAAAACTGTGAAAGAAGCTCATGAAAAATTAAAGGTGGGAAGTGTTGATGCGTTACACTGCTACTATGCACACGGAGAAGAAAACGAAAATTTTCAAAGGCGAAGCTATTGGTTGCTTGAACAGGATACACACATAGTATTTGTCCATTACTTGGAAGTTAAGAGTAACAAGTCAAATATTGGAGGAAACGCTGATAGCAATGAGGTCATATCAGATTCTCAAAAGGTCAACTCTTCGTCGTCTGGCATTCCCACAACTTATAGTAGTGTGCCTTCTCTAAGTACAGATTCCATGAGCCCAACTAGTAGCTATACATCTTTACGTGAAGATGCTGATTCAGGTGATCATGGACAGTCATCAGTTTCTGGAATGGATTATATCCCACCTTTTAGCAGGGATACATTTAGAGGAAATGGTGCTACTTGCATTGATGGCCAGGCATCATGGGACACGGTCTTGCAATCCACTGCTGAGTTGCATGCTGATCCTTCTCTTGTATCTTTTACTTCCATCCCATCTGGTTCACTGTCAAACATCCTTCACCAAGAAGATAACATCTTGGGTGACTTTTCAATGAGCAGAAGTGGCCTCGCTATTGGAGCAGGGAGTTCTCAGCCTCTCCAATCAAATTGGCAGATTCCTTTTGACGACAACACAGGAAATATGCCAACCTTTACCCAATCATTGAGTTTGGAATTTGCATCTGATTATGGAACTGGTTTACTAGGGAACGAAGCTGATAATGGAAGTTCTGTAATTGATCCTGTCTTGTTTAGTTTTCATGGTGAGCCAAAAGAGAAGCTTGCACATCAAAACTATTTGGAAGAGAAGGTAGATGGGCACCCGCGAGATGACCTTAAGTCTAATTCCACAAAAGAAGTTCGCAGTGAAGAAACTATTAATTATCCCTTACCTGTGAGACGCACATTATTGGATAGGGATGAGAGCTTGAGGAAGGTTGATAGCTTCAATCGGTGGATTACTAAAGCCCTTGGAGAGGTGGACGATTTGAACATGCAATCCTCACCTGGTATTTCATGGAGTGCAGATGATTGTGGGCATGTGATAGATGATACCTCCCTGAGCCCATCTCTGTCTCAGGATCAGCTGTATAGCATATCTGATTTTTCACCTAAATGGGCTTATGCTGAGTCAGACACTGAGGTGTTGATTATTGGATCCTTTTTAAAAAGTCAACCAGATGTTACAACCTGTAACTGGTCCTGTATGTTTGGGGAAGTTGAGGTTCCTGCTGAGGTTGTAGCTAATGGAATTCTGTGTTGTCAAGCTCCTCCTCACAAGGTTGGGCGGGTCCCTTTCTATGTAACATGTGCCAATAGGTTAGCTTGCAGTGAAGTGCGGGAATTTGATTTCAGAGACGGCTATTCTAGAAATGTAGATTATACAGATTTTTTCAACAGTTCGAATGACATGCTACTTCATTTGCGGCTGGAGGAGTTTCTTTCTTTGAAACCAGTGCACCCTTCAAATCAAACCTTTGAGGGCGATGTGGAGAAAAGGAGCTTAATTCTTAAGCTTATTTCACTGAGAGAGGAAGAAGAATATTCAAGTAAGGAAGAGCAGAGTGTAGAGATGGATATATCACGACACAAGGTGAAGAAGCATCTGTTTCATAGGCAGTTTAAAGAGAAACTGTACTCATGGCTTCTTCACAAGGTAACTGAGAGTGGTAAAGGGCCAAATGTGTTAGATAAGGACGGGCAGGGCGTGCTACATTTAGCAGCTGTTCTTGATTATGACTGGGCAATAATCCCAATTTTAGCTGCTGGAGTTAATATCAACTTCCGTGATGTGAATGGTTGGACGGCCTTGCATTGGGCAGCATTCTATGGCAGAGAGCAGACAGTTGGATTCCTTGTATCCAAGGGGGCAGATTCTGGAGCATTGACGGATCCATCTCCAGAATCTCCTTCAGGCAGAACAGCTGCAGATCTCGCCTCTAGCAATGGGCACAAAGGACTCTCTGGTTTTCTAGCAGAGTCTTCATTAACCAGCCACCTTGAATCCCTCACGGTGGATGATTTACACAAAGGTAGTCAGCAAGAAGTTTCAGGAACAAAAGCAGTGCAGACAGTTTCAGAACGAACTGCAACACCTGTGGTCTATAATGATATGCCTGATGCCCTCTGCCTTAAAGATACTCTAACCGCTGTCCGTAATGCGACACAAGCTGCTGATCGCATACATCAAGTATTCAGAATGCAGTCCTTTCAGAGGAAGAAGCAGTTAACTCAGGATGAGGATGAGGATGAGGATGATGAATTTGGTTTGTTAGATCAGCAGGCTGTTTCTCTTCTAGCTTCGAAGGCGCGCAAGTCAGGACAAGGAGATGGCTTAGTCAATGCTGCTGCAACTCAAATACAGAAAAAGTTTCGTGGTTGGAAGAAGAGAAAAGAATTCTTGATCATTCGTCAAAGAATTGTTAAAATCCAGGCCCATGTAAGAGGTCACCAGGTGAGGAAGCAGTATAAAACTGTCATCTGGTCTGTGGGAATCCTGGAGAAGGTTATATTACGCTGGAGACGCAAGGGTAGTGGTCTACGTGGGTTTCGACCAGAAGCCCTTAATAAAGCCCCCAGTCAACAAAATGATTCTCTGAAAGAGGATGATTACGATTATTTAAAGGAAGGGCGAAAACAAAAAGAGGAAAAGATCCAAAAGGCCCTTTCTAGGGTGAAGTCCATGGTTCAGTATCCGGAGGCGCGGGCTCAATACCGGCGGGTGCTAAATGTTGTTGAAGACTTCCGTCAAAAGAAGGATTGTAATATGGGTTTGATGAGTTCTGAAGACACAGTTGATGGTGTGGAGGATTTGATTGATATTGATATGCTTCTAGATGATGAAAATTTCGACCCTATATTTGATTGA 3132 0.4304 MAEPPSYGLGPRLDIQQLQFEAQHRWLRPAEICEILRNYRMFHITPEPHTRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDALHCYYAHGEENENFQRRSYWLLEQDTHIVFVHYLEVKSNKSNIGGNADSNEVISDSQKVNSSSSGIPTTYSSVPSLSTDSMSPTSSYTSLREDADSGDHGQSSVSGMDYIPPFSRDTFRGNGATCIDGQASWDTVLQSTAELHADPSLVSFTSIPSGSLSNILHQEDNILGDFSMSRSGLAIGAGSSQPLQSNWQIPFDDNTGNMPTFTQSLSLEFASDYGTGLLGNEADNGSSVIDPVLFSFHGEPKEKLAHQNYLEEKVDGHPRDDLKSNSTKEVRSEETINYPLPVRRTLLDRDESLRKVDSFNRWITKALGEVDDLNMQSSPGISWSADDCGHVIDDTSLSPSLSQDQLYSISDFSPKWAYAESDTEVLIIGSFLKSQPDVTTCNWSCMFGEVEVPAEVVANGILCCQAPPHKVGRVPFYVTCANRLACSEVREFDFRDGYSRNVDYTDFFNSSNDMLLHLRLEEFLSLKPVHPSNQTFEGDVEKRSLILKLISLREEEEYSSKEEQSVEMDISRHKVKKHLFHRQFKEKLYSWLLHKVTESGKGPNVLDKDGQGVLHLAAVLDYDWAIIPILAAGVNINFRDVNGWTALHWAAFYGREQTVGFLVSKGADSGALTDPSPESPSGRTAADLASSNGHKGLSGFLAESSLTSHLESLTVDDLHKGSQQEVSGTKAVQTVSERTATPVVYNDMPDALCLKDTLTAVRNATQAADRIHQVFRMQSFQRKKQLTQDEDEDEDDEFGLLDQQAVSLLASKARKSGQGDGLVNAAATQIQKKFRGWKKRKEFLIIRQRIVKIQAHVRGHQVRKQYKTVIWSVGILEKVILRWRRKGSGLRGFRPEALNKAPSQQNDSLKEDDYDYLKEGRKQKEEKIQKALSRVKSMVQYPEARAQYRRVLNVVEDFRQKKDCNMGLMSSEDTVDGVEDLIDIDMLLDDENFDPIFD 1043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00189 1043 SUPERFAMILY E set domains 454 539 IPR014756 -
Mepo6g00189 1043 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 14 1006 - -
Mepo6g00189 1043 SMART CG_1_2 18 135 IPR005559 GO:0003677
Mepo6g00189 1043 Gene3D - 868 914 - -
Mepo6g00189 1043 Gene3D Immunoglobulins 447 542 IPR013783 -
Mepo6g00189 1043 Pfam IPT/TIG domain 453 528 IPR002909 -
Mepo6g00189 1043 Pfam Ankyrin repeats (3 copies) 636 713 IPR002110 GO:0005515
Mepo6g00189 1043 MobiDBLite consensus disorder prediction 719 733 - -
Mepo6g00189 1043 ProSiteProfiles Ankyrin repeat profile. 687 719 IPR002110 GO:0005515
Mepo6g00189 1043 MobiDBLite consensus disorder prediction 357 378 - -
Mepo6g00189 1043 MobiDBLite consensus disorder prediction 152 206 - -
Mepo6g00189 1043 SMART ANK_2a 687 716 IPR002110 GO:0005515
Mepo6g00189 1043 SMART ANK_2a 726 755 IPR002110 GO:0005515
Mepo6g00189 1043 MobiDBLite consensus disorder prediction 715 735 - -
Mepo6g00189 1043 ProSiteProfiles IQ motif profile. 869 897 IPR000048 GO:0005515
Mepo6g00189 1043 MobiDBLite consensus disorder prediction 152 189 - -
Mepo6g00189 1043 FunFam Calmodulin-binding transcription activator 2 867 915 - -
Mepo6g00189 1043 Pfam CG-1 domain 21 133 IPR005559 GO:0003677
Mepo6g00189 1043 ProSiteProfiles CG-1 DNA-binding domain profile. 15 140 IPR005559 GO:0003677
Mepo6g00189 1043 Gene3D - 626 803 IPR036770 -
Mepo6g00189 1043 ProSiteProfiles IQ motif profile. 891 915 IPR000048 GO:0005515
Mepo6g00189 1043 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 867 918 IPR027417 -
Mepo6g00189 1043 SMART iq_5 867 889 IPR000048 GO:0005515
Mepo6g00189 1043 SMART iq_5 890 912 IPR000048 GO:0005515
Mepo6g00189 1043 FunFam Calmodulin-binding transcription activator 2 447 543 - -
Mepo6g00189 1043 ProSiteProfiles Ankyrin repeat region circular profile. 687 713 - -
Mepo6g00189 1043 Pfam IQ calmodulin-binding motif 870 888 IPR000048 GO:0005515
Mepo6g00189 1043 Pfam IQ calmodulin-binding motif 893 912 IPR000048 GO:0005515
Mepo6g00189 1043 MobiDBLite consensus disorder prediction 357 375 - -
Mepo6g00189 1043 SUPERFAMILY Ankyrin repeat 634 748 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00189 Mepo-Chr6 1872263 1884119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00189 1 1007 CAMTA Transcription Factor Family AT5G64220 52.422 0.0 1025
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Mepo6g00189 CG-1 4e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00189 K21596 - gmx:100818124 1559.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g03509 2 44660383 44669208 Mepo6g00189 6 1872263 1884119 PCT