Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00173 ATGGCAGCTGCAACATCTGGTGCTGTGTTGAATGGTTTGGGATCTTCCTTCTTATCTGGAGGTAAGAGGAGCCAAACCTTGTTAGCTACTACTGCTATTGGAGCCAAAGTTGGTGTTGCAGCTGGTACTCCTAAAAGACTTATTGTTGCTGCTGCTGCTTCTGCACCAAAGAAGTCATGGATCCCTGGTGTTAGATTTGGTGGAAATCTCGTCGACCCAGAATGGCTCGACGGATCACTACCAGGTGACTTTGGTTTTGACCCACTAGGCCTTGGCAAGGACCCAGCATTTCTGAAATGGTACAGAGAAGCTGAGCTTATTCATGGAAGGTGGGCAATGGCTGCAGTTCTAGGCATCTTTGTTGGTCAGGCATGGAGTGGAGTTCCATGGTTCGAGGCCGGAGCTGACCCCAATGCAATTGCTCCATTCTCCTTTGGTACTCTTCTAGGCACTCAGTTGATTCTCATGGGGTGGGTAGAGAGCAAGAGATGGGTGGATTTCTTCAACCCGGATTCACAGTCAATCGAATGGGCTACTCCATGGTCAAAAACCGCTGAGAACTTCGCTAATGCAACCGGAGAACAAGGCTACCCAGGGGGGAAATTCTTCGACCCATTGTCCCTTGCTGGTACCATTGAAAACGGAGTTTACATTCCAGATACAGAGAAGCTAGAGAGATTGAAACTGGCTGAGATTAAGCATGCTAGGCTTGCTATGTTGGCTATGTTGATTTTCTACTTTGAAGCTGGACAAGGGAAGACCCCCCTTGGTGCTCTTGGCTTGTAA 786 0.4847 MAAATSGAVLNGLGSSFLSGGKRSQTLLATTAIGAKVGVAAGTPKRLIVAAAASAPKKSWIPGVRFGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGVPWFEAGADPNAIAPFSFGTLLGTQLILMGWVESKRWVDFFNPDSQSIEWATPWSKTAENFANATGEQGYPGGKFFDPLSLAGTIENGVYIPDTEKLERLKLAEIKHARLAMLAMLIFYFEAGQGKTPLGALGL 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00173 261 Gene3D Chlorophyll a/b binding protein domain 73 260 - -
Mepo6g00173 261 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 69 259 IPR001344 GO:0009765|GO:0016020
Mepo6g00173 261 SUPERFAMILY Chlorophyll a-b binding protein 70 261 - -
Mepo6g00173 261 FunFam Chlorophyll a-b binding protein, chloroplastic 73 260 - -
Mepo6g00173 261 Pfam Chlorophyll A-B binding protein 73 249 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00173 Mepo-Chr6 1771813 1773256 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00173 1 261 Chloroplast and Mitochondria Gene Families AT1G15820 82.375 2.84e-153 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00173 K08917 - gmx:100500118 483.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g00173 6 1771813 1773256 Mepo6g00173 6 1771813 1773256 ECH