Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00167 ATGGATGTTTTATTATCCTTAAACTCAGGCCTCAATACCATTTCCAAACCATATCAACATCATATCCTTCCACTCTCAAATAGACAACCTCGTATGCAGTTTTATGTTTCATGCAGAGCCACAAAAAATGTTCCAATTCATCACGAGTTGAATGATGATGATGGCAACTTGTATAAGATACTACGTTTGAGTCCTAAAAGTGCAACAATGGATGATATAAAGAGATCATATAGAACAATGGCTCTTCAGTATCATCCTGATGTGTGTCATGATCGTTTGAAGAAAGAGGAATCAACGAGGATGTTTGTACAACTCAATGCAGCTTATGAGACTTTGTCAAATCCAAAGCTTAAAGAAGAATATGACTTTGAGTTGGGTTTGGGTAATTTGAGAAGAAGTAGGTGGATGGAACAAATGGTTGAATTGAATAGAAGGTCTCATACACGTGAGGCTGGATCATCATCATGGGGTAGTAGAATGAGGGCCAAAAACAATATAACCAAAGATGATCATGATAACAACTAG 525 0.3695 MDVLLSLNSGLNTISKPYQHHILPLSNRQPRMQFYVSCRATKNVPIHHELNDDDGNLYKILRLSPKSATMDDIKRSYRTMALQYHPDVCHDRLKKEESTRMFVQLNAAYETLSNPKLKEEYDFELGLGNLRRSRWMEQMVELNRRSHTREAGSSSWGSRMRAKNNITKDDHDNN 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00167 174 ProSitePatterns Nt-dnaJ domain signature. 102 121 IPR018253 -
Mepo6g00167 174 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 28 165 - -
Mepo6g00167 174 MobiDBLite consensus disorder prediction 144 174 - -
Mepo6g00167 174 Gene3D DnaJ domain 42 148 IPR036869 -
Mepo6g00167 174 PRINTS DnaJ domain signature 97 117 IPR001623 -
Mepo6g00167 174 PRINTS DnaJ domain signature 77 92 IPR001623 -
Mepo6g00167 174 PRINTS DnaJ domain signature 59 77 IPR001623 -
Mepo6g00167 174 CDD DnaJ 56 114 IPR001623 -
Mepo6g00167 174 SUPERFAMILY Chaperone J-domain 51 125 IPR036869 -
Mepo6g00167 174 Pfam DnaJ domain 56 122 IPR001623 -
Mepo6g00167 174 SMART dnaj_3 55 117 IPR001623 -
Mepo6g00167 174 ProSiteProfiles dnaJ domain profile. 56 125 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00167 Mepo-Chr6 1714744 1715399 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00167 58 122 C2H2 Transcription Factor Family AT1G74250 43.284 9.98e-08 48.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g00167 6 1714744 1715399 Mepo6g00167 6 1714744 1715399 ECH
Mepo2g03526 2 44793430 44794230 Mepo6g00167 6 1714744 1715399 PCT