Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00161 ATGCTTATTGCATTCAAGAGAAACTTAAATGATCCTAACAATGCTCTTGAAAGTTGGGATTCTACCCTTCTCAATCCCTGCACGTGGTTTCATGTTACATGCAGTGGTGATAGAGTAATCCGTGTTGATCTTGGAAATGCAAACCTTTCTGGTATACTGGTTTCAAGCCTAGGGGGTCTCTCGAATTTGCAGTACTTGCGTCTCAACAATAACAGCTTGACTGGAGTCATTCCCATTTCTTTGACAAATGTTACTACGTTGCAAGTTCTTGATGTCTCAAACAATAATCTAGAAGGGGATTTCCCAGTGAATGGTTCATTTTCAATATTTACCCCTATCAGTTATCATAATAATCCTCACATGAAACAACAAAAAATCATTCCAGCGCCACTTTCTCCACCATCACCAGCTTCTTCAGGTAGCATTAATACCGGAGCTATTGCTGGAGGAGTTGCTGCTGCTGCTGCTCTGTTGTTTGCAGCCCCTGCAATTGCACTTGTTTACCGGCAAAAAAGAAAACCAGAGGATCATTTCTTTGACGTTCCTGCTGAGGAGGATCCTGAAGTTCACCTTGGTCAGCTTAAAAGGTTTTCGCTACGTGAGCTGCTAGTAGCAACAGATAACGTCAGCAACAAAAACAATATAGGTCAAGGTGGATTCGCAAAGGTTTATAAAGGACGCTTAGCTGATGGCACTCTTGTAGCAGTAAAAAGACTTAGAGAGGAACGCACATGTGGTGGGGAACAGGGTGGGGAGCTGCAATTTCAGACAGAAGTGGAAATGATCGGCATGGCTGTGCATCCTAATTTGCTTTGTCTTCGTGGTTTTTGTGTGACATCTACTGAACGTTTGCTTGTGTATCCTTTAATGGCTAATGGAAGTTTAGCGTCGTGTTTCAAAGAACGTAAGGCCTCTCAACCGCCTCAACCGCCGCTTGATTGGCCAATGCGGAAGAATATTGGGCTTGGAGCTGCCAAGGGGCTTGCTTACTTGCATGATCATTGTGACCCTAAGGTTATTCATCGTGATGTGAAAGCAGCAAATATATTGTTGGGTGAGGAATTTGAAGCAGTTGTTGGAGATTTCGGTTTAGCAAAGCTTATGGCTTACAAAGATACTCATGTCACTACAGCTGTTCGAGGTACACCTGGGTATATATCCCCTGAGTACCTGTCAACAAGAAAGTCTTCAGAAAAGACTGATGTTTATGGATATGGCATGATGCTTTTTGAACTAATAACTGGACAGAGTGCTTATGATCTAGGAGATCTTGCCAAAAAAGATGATGATATGATGTTGCATGATTGGGTTAAAGGACTTCTCAGAGACAAGAAATTGGAAACACTGGTGGACAAGAAGTTAGAAACACTGGTGGATGCAAAATTAAAGGGAAATAATGATGACGTAGAGAAGCTAATCCAAGAGGTAGAGAAGTTAATCCAAGTGGCTTTACTATGCACACAATTTTCACCTATGGAAAGACCAAAAATGTCTGAGGTGGTGAGAATGCTTGAAGGCGATGGTTTGGCGGAAAAATGGGAGCAATGGCAGAAAGAGGAGACGTACCGACAGGCTTTTAAGAAAAACCACATACATCACCTTAATGCAAATTGGATAGTAGATTCAACTTCACATACCCAAATAGATTCAACTTCACATATCGAGCCAGATGAACTCTCAGGTCCTAGATGA 1692 0.4214 MLIAFKRNLNDPNNALESWDSTLLNPCTWFHVTCSGDRVIRVDLGNANLSGILVSSLGGLSNLQYLRLNNNSLTGVIPISLTNVTTLQVLDVSNNNLEGDFPVNGSFSIFTPISYHNNPHMKQQKIIPAPLSPPSPASSGSINTGAIAGGVAAAAALLFAAPAIALVYRQKRKPEDHFFDVPAEEDPEVHLGQLKRFSLRELLVATDNVSNKNNIGQGGFAKVYKGRLADGTLVAVKRLREERTCGGEQGGELQFQTEVEMIGMAVHPNLLCLRGFCVTSTERLLVYPLMANGSLASCFKERKASQPPQPPLDWPMRKNIGLGAAKGLAYLHDHCDPKVIHRDVKAANILLGEEFEAVVGDFGLAKLMAYKDTHVTTAVRGTPGYISPEYLSTRKSSEKTDVYGYGMMLFELITGQSAYDLGDLAKKDDDMMLHDWVKGLLRDKKLETLVDKKLETLVDAKLKGNNDDVEKLIQEVEKLIQVALLCTQFSPMERPKMSEVVRMLEGDGLAEKWEQWQKEETYRQAFKKNHIHHLNANWIVDSTSHTQIDSTSHIEPDELSGPR 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00161 563 SUPERFAMILY L domain-like 2 103 - -
Mepo6g00161 563 Pfam Leucine rich repeat 42 97 IPR001611 GO:0005515
Mepo6g00161 563 SUPERFAMILY Protein kinase-like (PK-like) 188 505 IPR011009 -
Mepo6g00161 563 FunFam Somatic embryogenesis receptor kinase 1 178 289 - -
Mepo6g00161 563 ProSitePatterns Protein kinases ATP-binding region signature. 215 237 IPR017441 GO:0005524
Mepo6g00161 563 Gene3D Ribonuclease Inhibitor 1 112 IPR032675 -
Mepo6g00161 563 Pfam Leucine rich repeat N-terminal domain 2 35 IPR013210 -
Mepo6g00161 563 Pfam Protein kinase domain 211 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00161 563 FunFam Somatic embryogenesis receptor-like kinase 1 290 524 - -
Mepo6g00161 563 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 2 515 - -
Mepo6g00161 563 Gene3D Transferase(Phosphotransferase) domain 1 290 524 - -
Mepo6g00161 563 SMART serkin_6 209 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00161 563 Gene3D Phosphorylase Kinase; domain 1 178 288 - -
Mepo6g00161 563 ProSitePatterns Serine/Threonine protein kinases active-site signature. 339 351 IPR008271 GO:0004672|GO:0006468
Mepo6g00161 563 ProSiteProfiles Protein kinase domain profile. 209 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00161 563 FunFam Leucine-rich repeat receptor-like kinase 1 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00161 Mepo-Chr6 1656246 1662711 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00161 2 563 Receptor kinase-like Gene Family AT1G71830 61.465 0.0 647
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Mepo6g00161 Pkinase 4.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00161 K13416 - gmx:100800522 749.584