Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00160 ATGAATATAAACATGGAGCAAGTGACTTCATCTTCTAAAGCTTCCTTTCTCTTTTTGGCTATTTTGGTGCTTCATTTGCTGCTAAAAGCTTCTTCCAATGAAGAAAGTGATGCACTGAATGTATTCAAGAGCGCCTTGAATGATCCTAACGATGTTCTTCATAGTTGGGATGCTACCCTTGTCAATCCCTGCACGTGGTTTCATGTTATATGCAATGGTGGTGGTAGAGTAATCCGTGTTGATCTTGCAAATGCAAACCTTTCTGGTAACCTGGTTTCAAATCTTGGTGATCTCTCAAATTTGGAGTACTTGGAACTTTATAATAATAAAATAACAGGAACAATCCCAGAAGAGCTAGGAAATTTGACAAACTTGGTGAGCTTGGATCTTTACTTGAACAATATAAGTGGTACCATACCGAATACATTGGGCAAGCTTCAAAAACTACGCTTCCTGCGTCTCAATAATAACAGCTTGACTGGAGTCATTCCCATTTCTTTGACAAATGTTACTACACTGCAAGTTCTTGATGTCTCAAACAACAATCTAGAAGGGGATTTCCCAGTGGATGGTTCATTTTCATTATTTACCCCTGTCAGTTATGATAATAATCCTCGCATGAAAAGACCAAAAAACATTCCAGCGCCTCTTTCTCCACCATCACCAACTTCTTCAGGTAGCTCGAATACTGGAGCTATTGCTGGAGGAGTTGCTGCTGCTGCTGCTCTGTTGTTTGCAGCCCCTGCAATTGCACTTGTTTACTGGCAAAAAAGAAAACCACAGGATCATTTCTTTGACGTTCCTGCTGAGGAGGATCCTGAAGTTCACCTTGGTCAGCTTAAAAGGTTTTCGCTACGTGAGCTGCTAGTAGCAACAGATAACTTCAGCAACGAAAACATTATAGGTAAAGGAGGATTCGCAAAGGTTTATAAAGGACGCTTAGCTGATGGCACTCTTGTAGCAGTAAAAAGACTTAAAGAGGAACGATCAAAGGGTGGGGAGCTGCAATTTCAGACAGAAGTAGAAATGATCGGCATGGCTGTGCATCGTAATTTGCTTCGTCTTCATGGTTTTTGCGTAACATCTACTGAACGTTTGCTTGTGTATCCTTTAATGGCTAATGGAAGTGTAGCATCGTGTTTACGAGAACGTAATGACTCTCAACCGCCGCTTGAGTGGCCAATGCGGAAGAATATTGCGCTAGGAGCTGCCAGGGGGCTTGCTTACTTGCATGATCATTGTGACCCTAAGATTATTCATCGTGATGTGAAAGCTGCAAATATATTGTTGGATGATGAATTTGTAGCAGTTGTTGGAGATTTCGGTTTAGCAAAGCTTATGGCTTACAAAGATACCCATGTCACTACTGCTGTTCAAGGCACACTTGGGCATATACCACCTGAGTACCTGTCAACCGGAAAGTCTTCAGAAAAGACTGATGTTTTTGGATATGGTACGATGCTTCTTGAACTCACAACTGGACAGAGGGCTTTTGATCTAGCACGTCTTGCCGGTGATGATGATGTGATGTTGCTTGATTGGGTTAAAGGACTTCTCCAAGACAAGAAGTTGGAAACACTTGTTGATGCAGAGCTAAAGGGAAATTATGATGCTGAAGAGATAGAAAAGGTAATTCAAGTTGCTTTACTATGCACACAAGGGTCCCCTATGGAAAGGCCTAAGATGTCTGAGGTGGTTAGAATGCTAGAAGGTGATGGTTTGTCCGAAAAATGGGAGCAATGGCAGAAAGAAGAGGCGAACCGACAGGATTTTAACAACAACCACATGCATCACTTTAATACAAATTGGATAGTAGTAGACTCAACTTCACATATTCAGGCAGATGAACTCTCGGGTCCTAGATGA 1866 0.418 MNINMEQVTSSSKASFLFLAILVLHLLLKASSNEESDALNVFKSALNDPNDVLHSWDATLVNPCTWFHVICNGGGRVIRVDLANANLSGNLVSNLGDLSNLEYLELYNNKITGTIPEELGNLTNLVSLDLYLNNISGTIPNTLGKLQKLRFLRLNNNSLTGVIPISLTNVTTLQVLDVSNNNLEGDFPVDGSFSLFTPVSYDNNPRMKRPKNIPAPLSPPSPTSSGSSNTGAIAGGVAAAAALLFAAPAIALVYWQKRKPQDHFFDVPAEEDPEVHLGQLKRFSLRELLVATDNFSNENIIGKGGFAKVYKGRLADGTLVAVKRLKEERSKGGELQFQTEVEMIGMAVHRNLLRLHGFCVTSTERLLVYPLMANGSVASCLRERNDSQPPLEWPMRKNIALGAARGLAYLHDHCDPKIIHRDVKAANILLDDEFVAVVGDFGLAKLMAYKDTHVTTAVQGTLGHIPPEYLSTGKSSEKTDVFGYGTMLLELTTGQRAFDLARLAGDDDVMLLDWVKGLLQDKKLETLVDAELKGNYDAEEIEKVIQVALLCTQGSPMERPKMSEVVRMLEGDGLSEKWEQWQKEEANRQDFNNNHMHHFNTNWIVVDSTSHIQADELSGPR 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00160 621 ProSitePatterns Protein kinases ATP-binding region signature. 301 323 IPR017441 GO:0005524
Mepo6g00160 621 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Mepo6g00160 621 SUPERFAMILY Protein kinase-like (PK-like) 274 570 IPR011009 -
Mepo6g00160 621 Gene3D Phosphorylase Kinase; domain 1 264 370 - -
Mepo6g00160 621 SUPERFAMILY L domain-like 33 196 - -
Mepo6g00160 621 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 16 580 - -
Mepo6g00160 621 Gene3D Transferase(Phosphotransferase) domain 1 372 589 - -
Mepo6g00160 621 FunFam Somatic embryogenesis receptor kinase 1 264 371 - -
Mepo6g00160 621 ProSitePatterns Serine/Threonine protein kinases active-site signature. 418 430 IPR008271 GO:0004672|GO:0006468
Mepo6g00160 621 FunFam Somatic embryogenesis receptor-like kinase 1 372 589 - -
Mepo6g00160 621 ProSiteProfiles Protein kinase domain profile. 295 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00160 621 FunFam Somatic embryogenesis receptor kinase 1 31 217 - -
Mepo6g00160 621 MobiDBLite consensus disorder prediction 204 229 - -
Mepo6g00160 621 Pfam Protein kinase domain 296 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00160 621 Gene3D Ribonuclease Inhibitor 31 213 IPR032675 -
Mepo6g00160 621 SMART serkin_6 295 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00160 Mepo-Chr6 1649000 1654927 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00160 17 621 Receptor kinase-like Gene Family AT4G33430 70.904 0.0 887
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Mepo6g00160 Pkinase 3.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00160 K13416 - gmx:100800522 942.954