Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00140 ATGGAGTCTGGTAAGAGTCTCCTTCTATGCCTAACATGGAGTCTGATTAGAGCTGAGTTTACAGGGACATTGATTCTGATGTTTGCTGGGACAGCCACTGCTGTTGTTAACCAAAAGACACAAGGCTCGGAGACTCTGATTGGGTGTGCTGCCTCTACTGGTCTTGCAGTTATGATCATCATCCTCTCCATCAGCCACATCTCCGGTGCTCATCTCAACCCTGCAGTCACCATTTCCTTTGCTGCATTGAAGCACTTCCCGTGGAAGCATGTGCCTATGTATATTGGTGCACAAGTTTTGGCATCAATATGTGCTGCATTTGCTCTCAAATGGGTTTTTCACCCTTTTATGGGTGGTATAGTCACTGTTCCTTCCGGAGGATATGGTCAAGCTTTTGCTTTAGAATTCATTATCAGCTTTAATCTAATGTTCGTTGTCACGGCAGTGGCCACCGACACAAGAGTTGTAGGAGAACTAGCAGGAGTTGCGGTGGGAGCAACTGTGATGCTTAATATACTCATAGCAGGGCCAATAACAGGAGCGTCAATGAACCCAGTAAGAACTCTAGGTCCAGCTATAGCTGCAAATAACTACAAAGCCATATGGGTATATCTCTTAGCTCCAATACTTGGAGCTCTAGGTGGGGCAGGAACTTATACTGCAGTCAAGCTTCCCGAAGAAAAGACTAATGCTTCTTCAAACCACCCCAGCTTTAGAAGATGA 723 0.4564 MESGKSLLLCLTWSLIRAEFTGTLILMFAGTATAVVNQKTQGSETLIGCAASTGLAVMIIILSISHISGAHLNPAVTISFAALKHFPWKHVPMYIGAQVLASICAAFALKWVFHPFMGGIVTVPSGGYGQAFALEFIISFNLMFVVTAVATDTRVVGELAGVAVGATVMLNILIAGPITGASMNPVRTLGPAIAANNYKAIWVYLLAPILGALGGAGTYTAVKLPEEKTNASSNHPSFRR 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00140 240 PRINTS Major intrinsic protein family signature 14 33 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g00140 240 PRINTS Major intrinsic protein family signature 53 77 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g00140 240 PRINTS Major intrinsic protein family signature 165 187 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g00140 240 PRINTS Major intrinsic protein family signature 202 222 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g00140 240 PRINTS Major intrinsic protein family signature 90 109 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g00140 240 PRINTS Major intrinsic protein family signature 134 152 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo6g00140 240 ProSitePatterns MIP family signature. 71 79 IPR022357 -
Mepo6g00140 240 Gene3D Glycerol uptake facilitator protein. 9 236 IPR023271 -
Mepo6g00140 240 FunFam Aquaporin NIP2-1 8 234 - -
Mepo6g00140 240 SUPERFAMILY Aquaporin-like 12 230 IPR023271 -
Mepo6g00140 240 PANTHER AQUAPORIN NIP2-1 16 233 IPR034294 -
Mepo6g00140 240 Pfam Major intrinsic protein 16 218 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00140 Mepo-Chr6 1446385 1449345 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00140 13 240 Major Intrinsic Protein MIP AT1G80760 80.702 2.34e-125 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00140 K09874 - tcc:18595413 367.081