Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00112 ATGTCTCTGACAGGCCGTCCTCGTGTCATTGTCAACGGTGTTCGAAGAATGAGAACCTTCCACTATTTCTGGTGTCTCAATTGCCAACGTACTGTTAGAATACCATCAACAAATACCATTCAAAATTATGGCTCTTTCTGTCCATATTGCTTCCATCAATTGCGTTATGAACTTGATATATCAAGGCCAAGACTTCTCATGAACGACCCTAATAACAGAAACATGGACCCTCCTCCTTCTACTAATCAGTTAATGGGTAGCTTAGCTTTCATCCTTGATCCATCTCTTAGAAGACAAGACCAAAACAACACAACACCACAATGGGGAACAGAACATGAAGATGTTCAAGATCAAAATCAAAATCCACAAGCATGGATTACACTAAGATTTGTAAGACCAACTCATCCAACAAGGCCTATTGCACCACCACCACCACCACCACAAAACATGGCTCTTCAGCTCAATGAAATTGACACCCCTTCATTAGATGAGTTCTTTGATGGGGTGATTCACAACAATATTAGACCAGGGCCGCCTCCAGCATCACCTTCGGCCATTGAAGCCTTGCCAATGGTTAAGGTAACAGAAGCACATTTAGCAAGTGATTCAAATTGTCCAATATGCAAAGATACGTTTGAGGTTGATGTGGAAGCGAGAGAGTTACCATGCAAACATTTCTACCATTCTGACTGCATTCTCCCTTGGCTTCAAATGCATAACACTTGCCCTGTATGCCGTCACGAGCTACAATGCATTGATAATAATAATGCTAATTACTACTTTTACCAAAATGAGAATGAGCAGCAGGGGTTTATGGGGTTTGAGGAATTTACAAGCAGCTTTAATTGGATTTGGAACCAACTTGCTTCGATTAGGCCTATTCGTGCAGTCCTAGATTGGACGCGGTCCTATTTTGAGCTCCACGCTCGTGCTCGTAGTAGAAGTAGCGCTTGGTGGAGAGCATTGCTCATTTCGTAG 978 0.4254 MSLTGRPRVIVNGVRRMRTFHYFWCLNCQRTVRIPSTNTIQNYGSFCPYCFHQLRYELDISRPRLLMNDPNNRNMDPPPSTNQLMGSLAFILDPSLRRQDQNNTTPQWGTEHEDVQDQNQNPQAWITLRFVRPTHPTRPIAPPPPPPQNMALQLNEIDTPSLDEFFDGVIHNNIRPGPPPASPSAIEALPMVKVTEAHLASDSNCPICKDTFEVDVEARELPCKHFYHSDCILPWLQMHNTCPVCRHELQCIDNNNANYYFYQNENEQQGFMGFEEFTSSFNWIWNQLASIRPIRAVLDWTRSYFELHARARSRSSAWWRALLIS 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00112 325 Pfam Ring finger domain 204 246 IPR001841 -
Mepo6g00112 325 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 102 249 - -
Mepo6g00112 325 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 170 252 IPR013083 -
Mepo6g00112 325 FunFam E3 ubiquitin-protein ligase RING1-like 169 252 - -
Mepo6g00112 325 ProSiteProfiles Zinc finger RING-type profile. 205 246 IPR001841 -
Mepo6g00112 325 SMART ring_2 205 245 IPR001841 -
Mepo6g00112 325 SUPERFAMILY RING/U-box 185 256 - -
Mepo6g00112 325 CDD RING-H2_RNF126-like 204 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00112 Mepo-Chr6 1077174 1078524 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00112 1 307 C3H Transcription Factor Family AT1G68180 30.744 8.82e-42 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00112 K11982 - gmx:100793656 364.77