Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00094 ATGGGGAGAAGAAACGGTGGCGGCGGTGGTGGTGGTTGCGGCGGAGGAAGATCTCTGCAATTTGCACTTCGCCGGCGAGTTGAAACCTGCAAATCAAAGTACACTACCGCCGAAGAAATTGTCGAACATCTTCGTTCAAATTACCCTGATTATCAACGAAGCCAACACAAACAACTCATTCGATTCGTTAATGACGCTCTTCAATCTTCCTCACGGAAACCCATCCCTAAAAATGCCGCTGTCGATGACGGCGACTCAGACTCCGACTCCGACGACGAGGTTCGTAATTCTTCTCGAAAGAGACGTAAGGATGCAATGATCGATGAATCTGAAGAAAAATTGCAAAGATTGGAAGCTCGTCACATTGAAAAGAGGATGAACACGCGGGTTTCATCATCATCCTCTGAAGAAGATTCTTCTTCTGATGATGAAGGTGCAGTTTCGACTTCAGAGGATGCAATTTATAGTGAGAAAGTTGAACCTGCTTTTGATTTGATGAAAGATATGCTTAGAAGTTCGTACACCGGGAACAAAGAAGGAATTAAGGAAAAGAATGTTGAATTGGATATTAGAAATTCAAGTAAAGCTACTATTACTGTTAATGCAGATGGCGGTGAATCGAAATCAGTGGTGAAAGGGAAAGCGAAGCAACTATCGAAGGGATCTGGTTTGGGTTCTAATGTAGGCGGCGGCGGTGGTGATGAGGTGAAAGGGAATGGAGGGCCGATGTTTAAGGATTTGGGTGGGATGAATGGTATATTGGAGGAATTGATGATGGATATTGTGTCATTGATTAATCCTGAGTTGCCTAAGCATTTAGGAGTGAAACCAGTGACTGGGATTTTGTTGCATGGACCACCTGGTTGTGGAAAGACTAGACTTGCTCATGCTATTGCCAATGAGACTGGTCTTCCTTTTCATCGTATCTCGGCCACTGAGGTGGTTTCTGGTGTCTCAGGTGCATCCGAAGAATATATTAGAGAGCTTTTCGATAAAGCAAAAAGGACTGCTCCATCAATTGTTTTTATTGATGAGATTGATGCCATTGCTTCAAAAAGAGAGGATTTACAGCGTGAGATGGAGAAACGAATTGTGACCCAGTTAATGACTTCCATGGATGAACCAGAGACTTCTGACGAACCTCGTGGCTATGTTCTTGTAATTGGAGCCACAAATAGGCCTGATTCTCTTGATCCTGCTCTTAGACGGCCTGGTCGGTTTGATCGCGAGTTTTTTGTTGGCGTTCCTGATGAATCTGCCAGGGAGGAGATCCTTTCTGTTCTTACTCGCAACATTAAACTTGATGGTTCGTTTGATCTGCGTAAAATTGCCAGGTCTACTCCAGGATTTGTTGGTGCTGATTTGGCAGCTCTGGCCAATAAAGCTGGTAATTTGGCAATGAAGAGGATAATTGATGAAAGGAAACGTGAGTTATCTCAAGCTGTCATAAGTGAGAATACTAAAGGCTGGTGGAGAGAACCTTGGTTGCCTGAAGAAATAACTAAGCTTGCTATCAAAATGTCCGATTTCGAGGAAGCAGTCAAAATGGTGCAACCTTCAGCAAGAAGAGAAGGGTTCTCTTCCATTCCTAATGTTAAATGGGAAGATGTTGGTGGGCTTGATAGTTTAAGGCATGATTTTAATCGCTATATTGTAATGCGTGTAAAAAAACCCCAGTATTATGAGGGAATTGGGATGAATCTTGAGTCTGGATTTTTGCTTTTTGGACCTCCAGGTTGTGGTAAAACATTGATTGCCAAGGCTGTTGCCAATGAAGCAGGAGCTAATTTCATTCATATTAAGGGACCCGAGCTTCTAAATAAATATGTTGGGGAAAGCGAGCTTGCAGTGAGGACATTGTTTAATCGTGCAAGGACTTGTGCTCCATGTGTACTATTTTTTGATGAGGTTGATGCTCTGACTACTAAACGTGGTAAAGAAGGTGGATGGGTTATTGAAAGACTGTTGAACCAGTTGCTTATCGAGTTAGATGGTGCTGAGCAGCGGAGGGGTGTTTTTGTGATTGGTGCAACAAATAGGCCTGATGTGATGGACCCCGCTCTCTTACGGCCTGGTAGGTTTGGTAAATTGCTCTATGTTCCTCTCCCAAGCCCAGATGACCGTGTTTTGATATTGAAAGCTCTTGCAAGGAATAAACATATTGATTCTAGTGTGGATTTGAGTGCCATTGGAAGAATGGAAGCATGTGAAAACCTTAGTGGTGCTGATCTTGCAGAATTGATGAACGAAGCAGTAATGGCTGCTCTTGATGAGAAGTTTGCCTCAATTGAGACGACCTGCGATACATTGACCATTAGGACGAGTCATTTTGAAGTAGCACTAACTAAAGCTTCTCCATCTGTGTCAGCCACGCAAAGGGAACACTATGAGCGTTTGGCAAGGAGCCTTAAAGCGGCATGA 2421 0.4349 MGRRNGGGGGGGCGGGRSLQFALRRRVETCKSKYTTAEEIVEHLRSNYPDYQRSQHKQLIRFVNDALQSSSRKPIPKNAAVDDGDSDSDSDDEVRNSSRKRRKDAMIDESEEKLQRLEARHIEKRMNTRVSSSSSEEDSSSDDEGAVSTSEDAIYSEKVEPAFDLMKDMLRSSYTGNKEGIKEKNVELDIRNSSKATITVNADGGESKSVVKGKAKQLSKGSGLGSNVGGGGGDEVKGNGGPMFKDLGGMNGILEELMMDIVSLINPELPKHLGVKPVTGILLHGPPGCGKTRLAHAIANETGLPFHRISATEVVSGVSGASEEYIRELFDKAKRTAPSIVFIDEIDAIASKREDLQREMEKRIVTQLMTSMDEPETSDEPRGYVLVIGATNRPDSLDPALRRPGRFDREFFVGVPDESAREEILSVLTRNIKLDGSFDLRKIARSTPGFVGADLAALANKAGNLAMKRIIDERKRELSQAVISENTKGWWREPWLPEEITKLAIKMSDFEEAVKMVQPSARREGFSSIPNVKWEDVGGLDSLRHDFNRYIVMRVKKPQYYEGIGMNLESGFLLFGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFNRARTCAPCVLFFDEVDALTTKRGKEGGWVIERLLNQLLIELDGAEQRRGVFVIGATNRPDVMDPALLRPGRFGKLLYVPLPSPDDRVLILKALARNKHIDSSVDLSAIGRMEACENLSGADLAELMNEAVMAALDEKFASIETTCDTLTIRTSHFEVALTKASPSVSATQREHYERLARSLKAA 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00094 806 FunFam Ribosome biogenesis ATPase RIX7 234 414 - -
Mepo6g00094 806 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 244 523 IPR027417 -
Mepo6g00094 806 Pfam AAA+ lid domain 438 473 IPR041569 -
Mepo6g00094 806 Pfam AAA+ lid domain 724 765 IPR041569 -
Mepo6g00094 806 Coils Coil 100 127 - -
Mepo6g00094 806 Gene3D - 238 414 IPR027417 -
Mepo6g00094 806 FunFam Cell division control protein 48 homolog C 416 524 - -
Mepo6g00094 806 Gene3D - 416 524 - -
Mepo6g00094 806 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 530 800 IPR027417 -
Mepo6g00094 806 ProSitePatterns AAA-protein family signature. 672 690 IPR003960 GO:0005524|GO:0016887
Mepo6g00094 806 ProSitePatterns AAA-protein family signature. 385 403 IPR003960 GO:0005524|GO:0016887
Mepo6g00094 806 Gene3D - 530 797 IPR027417 -
Mepo6g00094 806 PANTHER AAA-FAMILY ATPASE 70 804 - -
Mepo6g00094 806 FunFam ATPase, AAA family protein 530 708 - -
Mepo6g00094 806 MobiDBLite consensus disorder prediction 91 131 - -
Mepo6g00094 806 Pfam ATPase family associated with various cellular activities (AAA) 281 414 IPR003959 GO:0005524|GO:0016887
Mepo6g00094 806 Pfam ATPase family associated with various cellular activities (AAA) 573 701 IPR003959 GO:0005524|GO:0016887
Mepo6g00094 806 MobiDBLite consensus disorder prediction 216 240 - -
Mepo6g00094 806 Gene3D - 703 782 - -
Mepo6g00094 806 SMART AAA_5 277 417 IPR003593 GO:0016887
Mepo6g00094 806 SMART AAA_5 568 704 IPR003593 GO:0016887
Mepo6g00094 806 MobiDBLite consensus disorder prediction 69 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00094 Mepo-Chr6 901350 906761 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00094 273 802 Calmodulin-binding Proteins AT3G56690 38.605 1.00e-120 387