Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g00085 ATGAACATGTTGATGATGAGTTTAATTAGTACTATTTCAGCAGCTCCATCTTCTTCATCTACATGTCCTATGGACCTTAACTATGTCCTAAGAATTCATTGGAACTCTTCAGCTTGTCAAAATTTCAAGTCTTTATCATCCAAAGAAACTAGCACTTGTTGTGCATCAGTTTTGTCTCTTTTTGGAATAGGATTTGCACAACATCTAAAAGAAACTTCACAGTTCAATCTTCAAGATCTTCAAACTTCAATTTCATGCATGCAAGATTTTCAATCAAAGCTTAACTCTTTATCACTTTACAACAACTTGGTCAACTCTTGTTTTGACCCTCTTCAATTTGTTATCTCTCGTAACATATGTGCAGGTATTGAAACTGTTCATGATTGGAATGAGAAGGTGGGTCAGAATTCATCTTTGAATACTGCTTGTAAACCAGATCTCACTGATCTTTCTCACTGTGATGTGTGTGTTTCTGCTGGATTACAAGTTAAGCAGAAGCTTGTTTCAATTAGTGGTAATGATTCTCAGTCTTTAAGTTGTTTCTACTTTGCAATTCTTTATGCTGCTGGAATTGTGAATGAGTTTGGACCTGAAAGTAATGGTGCTGTTACTTGTGCTTTTAGTTTACCTGTTTATTCACAAGTTGGTTCTGGTTCAAAGGGTCATCAGGGTCTTGTGTTTGGATTAACAGGAGCTGGTGTTGCTTTGTTTGTTATGTGTTCTTTGTTGGGTTTATATGTTTGGTGTGATAGGAAACGTATGAGGAAGAGAAAGCTTGAAACTTTTCAATTTGATTTTGATCCTGAGGAACAAGGTTCTAGGCGTAGGTTGAGGCCTAATACAGGTTCAATTTGGTACAAAATTCAGGAACTTGAGAAGGCTACTGATAATTTTTCATCCAAGAATTTCATAGGGAGAGGTGGGTTTGGTTTGGTTTTCAAAGGAACTTTGGCTGATGGATCTGTTGTTGCTGTTAAGAGGGTTTTAGAATCTGATTTTCAAGGGGATGTTGAGTTTTGTAATGAGGTTGAGATAATTAGTAATTTGAAGCACAGGAATCTGTTACCTCTTAGAGGTTGTTGTGTGGTTGATGAAAATGAGAATTATGGTGATAAAGGAAGTCAAAGATACCTTGTTTATGATTACATGCCAAATGGAAACTTGGAAGATCATCTTTTTGTATCGAAGGATCCTAAAAAAGCAAACAAATCATTGTCTTGGCCTCTTCGAAAAAACATAATCTTGGATGTGGGAAAAGGGTTGGCTTATTTACACTATGGAGTTAAGCCTGCAATTTATCATAGGGATATCAAAGCTACCAATATACTACTTGATGAAGATATGAGGGCAAGAGTTGCTGATTTTGGTCTTGCTAAACAAAGTAGGGAGGGTCAGTCTCATCTCACTACTAGAGTGGCCGGAACTCACGGATACCTAGCGCCGGAGTATGCGCTATATGGTCAGTTGACTGAGAAGAGTGATGTATACAGCTTTGGTGTGGTTGTTTTGGAGATAATGTGTGGTAGGAAGGCTCTTGATTTGTCCTCGTCGGGATCTCCGCGAGCATTCTTGATCACAGATTGGGCTTGGTCGTTGGTTAAATCGGGGAAAATAGACGAGGCTTTGGATGCTTCTCTTCTGAAAGATGATAACACTGCTAGTGCAAATCCTAAGAGCATAATGGAAAGGTTTTTGCTTGTTGGAATTCTATGTTCTCATGTAATGGTTGCTTTGAGGCCAACAATTTCTGATGCTTTGAAGATGTTGGAAGGTGATATTGAAGTTCCTCAAATTCCAGACAGGCCTATGCCTCTTGGCCATCCTGCATTTTATAATAATGATGGCAATGGAAACACTTTTAGCATATCTCCGGCATTAAGCGGCCTCAAATTGCCCGCTGGCGACATGCTCAGGTCCATTAGTGAGAGATGA 1932 0.3877 MNMLMMSLISTISAAPSSSSTCPMDLNYVLRIHWNSSACQNFKSLSSKETSTCCASVLSLFGIGFAQHLKETSQFNLQDLQTSISCMQDFQSKLNSLSLYNNLVNSCFDPLQFVISRNICAGIETVHDWNEKVGQNSSLNTACKPDLTDLSHCDVCVSAGLQVKQKLVSISGNDSQSLSCFYFAILYAAGIVNEFGPESNGAVTCAFSLPVYSQVGSGSKGHQGLVFGLTGAGVALFVMCSLLGLYVWCDRKRMRKRKLETFQFDFDPEEQGSRRRLRPNTGSIWYKIQELEKATDNFSSKNFIGRGGFGLVFKGTLADGSVVAVKRVLESDFQGDVEFCNEVEIISNLKHRNLLPLRGCCVVDENENYGDKGSQRYLVYDYMPNGNLEDHLFVSKDPKKANKSLSWPLRKNIILDVGKGLAYLHYGVKPAIYHRDIKATNILLDEDMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVVLEIMCGRKALDLSSSGSPRAFLITDWAWSLVKSGKIDEALDASLLKDDNTASANPKSIMERFLLVGILCSHVMVALRPTISDALKMLEGDIEVPQIPDRPMPLGHPAFYNNDGNGNTFSISPALSGLKLPAGDMLRSISER 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g00085 643 PANTHER OS01G0750732 PROTEIN 41 597 - -
Mepo6g00085 643 ProSitePatterns Protein kinases ATP-binding region signature. 304 326 IPR017441 GO:0005524
Mepo6g00085 643 CDD STKc_IRAK 304 591 - -
Mepo6g00085 643 SUPERFAMILY Protein kinase-like (PK-like) 279 590 IPR011009 -
Mepo6g00085 643 ProSitePatterns Serine/Threonine protein kinases active-site signature. 432 444 IPR008271 GO:0004672|GO:0006468
Mepo6g00085 643 Gene3D Phosphorylase Kinase; domain 1 269 382 - -
Mepo6g00085 643 ProSiteProfiles Protein kinase domain profile. 298 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00085 643 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 383 597 - -
Mepo6g00085 643 FunFam probable receptor-like protein kinase At1g11050 260 382 - -
Mepo6g00085 643 Pfam Protein kinase domain 300 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g00085 643 Pfam SPARK 17 180 IPR043891 -
Mepo6g00085 643 Gene3D Transferase(Phosphotransferase) domain 1 383 597 - -
Mepo6g00085 643 SMART serkin_6 298 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g00085 Mepo-Chr6 812379 815310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g00085 15 638 Receptor kinase-like Gene Family AT1G11050 63.349 0.0 785
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Mepo6g00085 Pkinase 1.3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g00085 - - gmx:100806560 1028.85